Sequence Description Alias PCC hrr Smo82212 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase ESP3, EMB2733 0.9523892332552608 1 Smo97336 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component 0.9490557214835085 2 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.9445145024691143 6 Smo98098 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione degradation.oxoprolinase OXP1 0.9408670595326163 4 Smo440912 0.9353939606074045 7 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976 0.9353109486072535 6 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.9306690090336714 7 Smo428704 0.9277337317495303 8 Smo441325 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component 0.9246335182513916 9 Smo161477 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1 0.9238299686063789 10 Smo170207 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16 0.923370520085586 11 Smo440052 0.9233109287975372 22 Smo61158 0.9215860704713829 13 Smo447098 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter ATEIN2, PIR2, EIN2, ERA3, ORE3, CKR1, ORE2 0.9203195290764759 14 Smo419030 ATXR1, SDG35 0.9174819054837854 15 Smo175932 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase BSL3 0.9164808391411837 28 Smo76597 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana 0.9150132540218291 17 Smo77212 Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase 0.9147595445812241 18 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP 0.9143089866287963 67 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9136958697662143 55 Smo438209 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) PRT6 0.9128413609058544 26 Smo408760 0.9120301488019354 22 Smo171199 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component RAPTOR1, ATRAPTOR1B, RAPTOR1B 0.9113811126872818 25 Smo63731 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component ATB' BETA 0.9107001296607461 24 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9088324841382893 25 Smo98006 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component ATCUL3A, ATCUL3, CUL3A, CUL3 0.9074606782753234 26 Smo79007 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9055937731733948 27 Smo98757 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC2 component ORC2, ATORC2 0.9029641994321054 28 Smo165973 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana GRV2, KAM2 0.9026902846248446 29 Smo1983 Pumilio homolog 1 OS=Arabidopsis thaliana APUM4, PUM4 0.9006137791090262 30 Smo13258 Multi-process regulation.Rop GTPase regulatory system.RopGAP GTPase-activating protein 0.9002778387111651 31 Smo445120 0.8988107153187316 32 Smo171237 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 0.8984157658817711 33 Smo431374 RNA biosynthesis.transcriptional activation.ARID transcription factor 0.8975608594297543 34 Smo168303 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica 0.8963600668985579 48 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.8950565318431202 36 Smo173603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14 0.8949893744565374 75 Smo33558 Probable WRKY transcription factor 19 OS=Arabidopsis thaliana 0.8946421260191069 38 Smo413864 0.8933496346077634 63 Smo70140 Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana 0.8932136714859827 40 Smo78344 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Prp17 component 0.8928901222945799 41 Smo156885 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG 0.8924489230493969 42 Smo14013 F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.8921067139335238 43 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter COPT5 0.8917481400230072 67 Smo141341 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG 0.8914332461656223 45 Smo443944 Probable phosphoinositide phosphatase SAC9 OS=Arabidopsis thaliana SAC9 0.8903016865500621 47 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.8895470573355676 52 Smo152973 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.8891899443342391 49 Smo96927 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana EMB2758 0.8889852893313885 50 Smo413471 0.8882519525921566 51 Smo438348 Protein MEI2-like 5 OS=Arabidopsis thaliana AML5, ML5 0.8873002356878409 53 Smo441216 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component ATRPA70A, RPA1A, ATRPA1A, RPA70A 0.8864596534002199 64 Smo440495 Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana 0.8864398875670435 55 Smo143427 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8862259552393146 56 Smo168663 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component MED33A, RFR1 0.8861170349297918 57 Smo139717 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP98 nucleoporin NUP96, PRE, SAR3, MOS3 0.8859911270854676 58 Smo409669 AT-GT2, GT2 0.885895442526103 59 Smo100621 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.8848129851256337 60 Smo101488 Protein ARABIDILLO 1 OS=Arabidopsis thaliana ARABIDILLO-1, ARABIDILLO1 0.884437321868065 61 Smo235886 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component ABO1, ELO2 0.8838858026754184 62 Smo154179 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL2 0.8836819655033026 76 Smo84835 0.8833531557325331 64 Smo422152 Phytohormones.ethylene.synthesis.ETO-type regulator protein ATEOL1, ETO1 0.8833008121786247 65 Smo50691 Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana 0.8821109364679848 67 Smo109200 RNA processing.RNA splicing.spliceosome assembly/disassembly.STIPL disassembly factor 0.88179631199012 68 Smo232603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component 0.8817147970770404 69 Smo235391 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.8808740251118753 73 Smo172575 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component ftsh4 0.880619538339036 74 Smo62477 Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana 0.8805148181023097 75 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8804915948152702 79 Smo409589 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ32/33 splicing factor RSZ33, AT-RS2Z33, RS2Z33, ATRSZ33 0.8796185566416814 77 Smo81360 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor MYB4R1, AtMYB4R1 0.8795676948088056 78 Smo136199 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.879531833934279 79 Smo411147 0.8785843117182545 80 Smo79692 Protein RMD5 homolog OS=Arabidopsis thaliana 0.8782083748843345 81 Smo94128 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8776308553068972 82 Smo88215 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR 0.8774532550615796 88 Smo149865 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.8771892079260576 84 Smo440870 0.8751549463896856 85 Smo97233 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.8751022869266946 86 Smo413256 0.8737880669443367 87 Smo184345 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana ATTPS5, TPS5 0.8735362035243817 88 Smo173646 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor 0.8730595476895014 89 Smo10839 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.872820989044728 90 Smo444681 0.8722688746198619 91 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) KEA1, ATKEA1 0.8722369175798678 92 Smo99910 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKG kinase 0.871989538792728 93 Smo118822 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1 0.8704586457213296 99 Smo75757 Vesicle trafficking.endomembrane trafficking.protein recycling.AP-5 cargo adaptor complex.AP5B large beta subunit 0.8696367398287251 98 Smo51367 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana 0.8689182863910004 100