Sequence Description Alias PCC hrr Smo92083 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.9237436027884095 6 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.9043144754047089 16 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.9018024860974981 25 Smo145597 Cytochrome P450 97B2, chloroplastic OS=Glycine max CYP97B3 0.9002658801386514 6 Smo85565 0.8981996611449865 16 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8980310294498359 13 Smo64073 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8966090861653976 7 Smo409724 0.8945977418501356 8 Smo110629 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.HST homogentisate solanesyltransferase HST, ATHST, PDS2 0.8932009905883064 9 Smo99197 D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana GEK1 0.8878012903349981 10 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.8849124142452012 11 Smo142751 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.8841439442431617 12 Smo117255 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana 0.8839259720552867 13 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8820273717745444 41 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC 0.8739190230079744 22 Smo100929 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP2 0.8721088266215676 16 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH 0.8719636958041963 72 Smo166751 0.8711698632386161 18 Smo57444 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana 0.8701788603382562 19 Smo73752 0.8669740710200154 20 Smo110000 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8668943849553197 29 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8665103886393213 54 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.8653478724563783 53 Smo270181 0.8627388064078229 27 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8600601170448601 88 Smo47118 0.858938082127728 28 Smo428653 Redox homeostasis.chloroplast redox homeostasis.NADPH-dependent thioredoxin reductase NTRC 0.858668231011339 27 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.8577233914246758 81 Smo33587 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.regulatory pyruvate orthophosphate dikinase kinase ATRP1, RP1 0.8573310090796803 29 Smo101399 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana 0.8572883576162169 30 Smo118724 0.8540975600797381 98 Smo75120 Protein root UVB sensitive 5 OS=Arabidopsis thaliana RUS5 0.8538997575859077 32 Smo65804 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8480781841909306 33 Smo440437 Amino acid metabolism.degradation.gamma-aminobutyrate (GABA).gamma-hydroxybutyrate formation.bifunctional gamma-hydroxybutyrate dehydrogenase and glyoxylate reductase GR2, GLYR2 0.8480660818208996 34 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8480311027200825 74 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.8463637389592013 46 Smo183248 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase GSA2 0.8455208860539177 38 Smo75234 Beta-glucosidase 40 OS=Arabidopsis thaliana BGLU40 0.8453139410304896 39 Smo173467 Phytohormones.strigolactone.synthesis.DWARF27 biosynthesis protein 0.8451571470140714 40 Smo98540 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component 0.8451423575579963 41 Smo170011 0.8441813148612893 43 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8438703506130015 44 Smo74924 0.8418724874182463 82 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATATM1, ATM1 0.8402861529180072 81 Smo93357 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.840044837371958 47 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8400278267975826 91 Smo437618 0.8389520534891147 49 Smo439533 0.8389443234628396 69 Smo269565 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR) ATRCCR, ACD2 0.8371607384018569 51 Smo104800 RNA processing.RNA modification.dihydrouridylation.tRNA dihydrouridine synthase 0.8370748155650831 52 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase PGLP1, ATPGLP1 0.8357411231279162 93 Smo437910 0.8357245644496286 55 Smo270556 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8312547762702887 84 Smo33876 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.8303151740023925 58 Smo415087 0.8298045219942451 59 Smo100790 Thiocyanate methyltransferase 1 OS=Brassica oleracea 0.8280362662547363 60 Smo402255 Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.8279480977824677 61 Smo77263 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 0.8259203130517548 63 Smo233392 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PPH1/TAP38 phosphatase TAP38, PPH1 0.8227344315470023 65 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.8221896431139109 66 Smo67570 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL4 component 0.8201887155870944 67 Smo67117 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8169772551348067 69 Smo270821 0.8166878359862748 70 Smo143443 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.8156505700058755 72 Smo448611 Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana 0.815644532606333 73 Smo77446 Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana 0.815524713266431 74 Smo75581 Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase 0.8144547640426901 76 Smo97796 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD-type) 0.8132008637124474 78 Smo71251 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8127968640661488 81 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.811310665743175 83 Smo95494 0.8087975058518161 87 Smo123928 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-C component NAP7, ATNAP7 0.8075983367380037 88 Smo85661 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.phosphorylation/dephosphorylation.PBCP phosphatase 0.8073265965558347 89 Smo109608 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8065867375961511 90 Smo447003 Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.8062492064572253 93 Smo410377 0.805474827882717 93 Smo409882 0.8034124215315964 98 Smo417702 0.8032365667479178 99 Smo120349 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB 0.8031761917567286 100