Sequence Description Alias PCC hrr Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.9617569362761995 1 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.9571998110842899 2 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312 0.9521300197222632 3 Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.9438684323048908 4 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.9435771918216417 5 Smo410877 SPD1 0.9378082208545258 6 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.9373204213015031 7 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.9350804304634072 8 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.934682033609584 9 Smo142036 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana 0.9338139827698141 10 Smo120007 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.9303148146474953 11 Smo428281 0.9296066798644832 12 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase QPT 0.9239041633698879 13 Smo85469 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) TAPX 0.9236562397565351 14 Smo442087 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor 0.9210888222847256 15 Smo60327 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM 0.9199804864142748 16 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.9158219187282369 17 Smo231207 Laccase-13 OS=Oryza sativa subsp. japonica LAC11 0.9123840463118891 18 Smo145357 RNA processing.organelle machineries.ribonuclease activities.RNase R exoribonuclease RNR1, ATMTRNASEII, EMB2730 0.910906450743511 19 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.9089007143976859 20 Smo186974 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL 0.9071296509100971 30 Smo77541 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana 0.9052015483239343 22 Smo81276 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.9051915791682293 23 Smo74924 0.9023453759408386 24 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.9013738454738921 25 Smo122255 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase ATHRS1, HRS1 0.9004917204186602 26 Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.8975710006026828 27 Smo166436 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana EX1 0.8964138022913561 28 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase OVA6, PRORS1 0.8950644790982465 29 Smo110531 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana PDE247, CLB19 0.8948657351946684 30 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8921840923072132 31 Smo92083 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8920739075789494 32 Smo445517 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.8916458300252424 33 Smo410009 0.891309244679661 34 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8900346956033984 35 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8893460174228247 36 Smo439642 0.8887969118866565 43 Smo20706 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays EMB1865 0.8884947225065585 41 Smo107490 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana LOI1, MEF11 0.8882947007176376 39 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8877578826745248 40 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.8872862002643127 41 Smo47998 Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana 0.8871785310789256 42 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.8863515355226926 43 Smo442673 Nutrient uptake.iron uptake.iron storage.PIC-type iron transporter 0.8862651241782223 44 Smo73828 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana 0.8852625439532366 45 Smo92242 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8851399709238101 46 Smo118724 0.884791193643742 47 Smo100125 Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana 0.8840685228353207 48 Smo91982 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease 0.883799037659002 54 Smo270556 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8813076972229852 50 Smo424522 0.8811101167736881 51 Smo47118 0.881028277470357 52 Smo93050 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana emb2004 0.8807828118490181 53 Smo132374 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8803376410217525 54 Smo85220 0.8803374414186519 55 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.8802340122257604 56 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.879350715048031 57 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.879317857745001 58 Smo42776 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.AAAP-type transporter 0.8790292611398446 59 Smo437721 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120 0.8786696917190125 60 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.8766126920786376 61 Smo101516 0.8755773545249972 62 Smo79851 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2 0.8754173314682437 63 Smo441624 Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana 0.8753122283881176 64 Smo80171 Protein biosynthesis.organelle translation machineries.translation elongation.EF-P elongation factor 0.8752281173679628 65 Smo402209 0.8744456606177338 66 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1 0.8732091248183217 67 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8731448413457673 68 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8727890601999037 69 Smo419922 0.8719013985554201 70 Smo405512 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component 0.8716544489092839 71 Smo165421 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.8692178971322596 72 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.8689680367282693 73 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1 0.8687591618978856 74 Smo36105 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana 0.8680536177552568 75 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8669916043380416 76 Smo146755 0.8658280182024884 77 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8649923513944767 78 Smo444750 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component 0.864767896124788 90 Smo67117 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8646638888984872 80 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8633871112642895 81 Smo437929 0.8628229691523499 82 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8622055117518446 83 Smo139232 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.8608399067276827 84 Smo403334 DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) 0.8594103744111535 85 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8574944745026597 86 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.8569411646582183 91 Smo414486 0.8563524102188832 89 Smo91663 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana 0.8558618694399827 90 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8555584409351212 91 Smo30615 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8536974372338509 92 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8526616434346508 93 Smo118636 0.8524434594218621 94 Smo437473 0.8516173497291706 96 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8507452140254064 97 Smo110342 Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana REME1 0.8486996627898161 100