Sequence Description Alias PCC hrr Smo164801 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE 0.9435771918216417 5 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.9418857460695688 5 Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.9386606765450972 4 Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.9316863122267567 4 Smo20706 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays EMB1865 0.9314622748790812 5 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.9305573963915764 6 Smo442211 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761 0.929152568551419 14 Smo429547 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.9288878344816428 8 Smo410877 SPD1 0.9209310382959678 9 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312 0.9182319755142806 12 Smo415636 0.9178384376386057 11 Smo98591 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana 0.9178165869806838 13 Smo186974 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL 0.9173942390513267 17 Smo60327 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM 0.9173003052393319 14 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.915913186848307 15 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.9152111489966382 16 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.9151158801184471 17 Smo439642 0.9126381629540229 18 Smo444750 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component 0.9113073127155479 19 Smo79851 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2 0.9110203556292388 20 Smo442673 Nutrient uptake.iron uptake.iron storage.PIC-type iron transporter 0.9102064484763924 21 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9101083277978085 22 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase OVA6, PRORS1 0.9096068610552411 23 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.908512185047978 24 Smo437721 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120 0.9083490073692977 25 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.9076574526394061 26 Smo402672 Ubinuclein-1 OS=Arabidopsis thaliana 0.9074143872773865 27 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.9064205115364797 28 Smo413675 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana 0.9061474825127666 29 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.9057005524597145 30 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase QPT 0.9034743104628633 31 Smo428281 0.903424935596403 32 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.9033892513469732 33 Smo442087 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor 0.9024941398970909 34 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.9024053826052949 35 Smo121150 0.9018530986867022 36 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.900596470031359 37 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.9003488819187307 38 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9002888303185906 39 Smo231207 Laccase-13 OS=Oryza sativa subsp. japonica LAC11 0.8998219608515932 40 Smo402861 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component TAF2 0.8993994760050044 68 Smo145357 RNA processing.organelle machineries.ribonuclease activities.RNase R exoribonuclease RNR1, ATMTRNASEII, EMB2730 0.8982846994167298 42 Smo418519 0.896930376329387 43 Smo409804 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8964849952482788 44 Smo92242 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8960297883820838 45 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica ATNOA1, ATNOS1, RIF1, NOS1, NOA1 0.8953607390700378 46 Smo74924 0.8952843667049544 47 Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.8947832894350197 48 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.8947499339120014 49 Smo430123 0.894457127702377 50 Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.8941085062271005 51 Smo85469 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) TAPX 0.8930668062334006 52 Smo73828 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana 0.8928565375319001 53 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8916476041365241 55 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.8916072799496009 56 Smo118636 0.8909652614163573 57 Smo406615 0.8907996554113463 67 Smo428406 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component ATEME1B, EME1B 0.8906934729695604 59 Smo91982 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease 0.8903902286266719 60 Smo106157 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.8901185796863709 61 Smo120007 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.8899095167135299 62 Smo156135 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease EMB2763 0.88969003454127 98 Smo402481 EMB140 0.8896690488214293 64 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8896090103046065 65 Smo181800 0.88940794691358 66 Smo421634 0.889399044222966 67 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8893765735516375 68 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.8893072704766972 69 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8892578622591883 70 Smo165421 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.8867443929206257 73 Smo437336 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.8860213057338385 74 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.885642880802244 75 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.8855841106777671 76 Smo410333 0.8853983413028333 77 Smo438142 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) GR, EMB2360, ATGR2 0.8845223844251786 78 Smo437796 0.8843406954555646 79 Smo424522 0.8837752908938938 80 Smo439163 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1 0.8824557147881373 81 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8806147695331337 82 Smo109207 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase TOP1BETA, TOP1 0.8792158791034144 83 Smo163635 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component 0.8791201767192826 84 Smo96986 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8776141935232746 85 Smo402586 0.8763963851334894 86 Smo166436 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana EX1 0.8754241779934485 87 Smo442872 0.8753898091625685 88 Smo430219 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component ATEME1B, EME1B 0.8750910185938489 89 Smo446032 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor 0.8743312637755143 90 Smo139232 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.8740159177827811 92 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATATM1, ATM1 0.8736599348236485 93 Smo62387 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana 0.8734944355154939 94 Smo409885 0.872981457340993 95 Smo270452 Protein-ribulosamine 3-kinase, chloroplastic OS=Arabidopsis thaliana 0.8725735942832216 96 Smo105247 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.8724108965013198 97 Smo441624 Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana 0.8722765454411013 99