Sequence Description Alias PCC hrr Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.9180996557177354 12 Smo442385 Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana 0.9146105213855648 2 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP 0.9132068199960192 25 Smo447679 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.9018228788845449 4 Smo442872 0.8993619148224918 18 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.8977801827990721 32 Smo430412 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8962849828027377 7 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.895078830165617 30 Smo443419 0.8948290035343723 29 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8914712198859444 28 Smo141010 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor COL3, ATCOL3 0.8886567839572866 11 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase QPT 0.8881977861335653 35 Smo439181 0.8862007742393047 30 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8855637710639461 28 Smo418465 0.8821131469337156 40 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8812140657296808 36 Smo404255 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8807462054137102 17 Smo112145 Photosynthesis.photophosphorylation.chlororespiration.PTOX terminal oxidase 0.8794562851643579 18 Smo445274 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst FKBP62, ROF1, ATFKBP62 0.8784829538418945 40 Smo438182 0.8759975778755958 31 Smo425390 0.8757036546943027 31 Smo439153 0.8740443717007118 50 Smo150329 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana AIR3 0.8715969952795599 37 Smo422148 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8714980157362462 24 Smo441971 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB 0.8704925500174506 25 Smo447716 0.8700872769176774 46 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.8679944402324657 74 Smo170091 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2 0.8677728020177858 37 Smo31884 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component 0.8649523992598634 50 Smo406591 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor 0.8637003695844452 45 Smo166787 F-box protein At1g55000 OS=Arabidopsis thaliana 0.8630740655887159 31 Smo141109 0.8615885730637243 46 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8607878306839766 78 Smo164116 0.8584969994150266 37 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8579753304570752 78 Smo416844 0.8570681905199928 66 Smo437462 MND1-interacting protein 1 OS=Arabidopsis thaliana 0.8570644593033067 37 Smo98813 0.8568203195489479 38 Smo412574 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.8549397846797369 56 Smo73985 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana 0.8542656211669583 62 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8538447359143396 73 Smo423505 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor 0.8492368483655586 43 Smo96554 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.CTP synthetase emb2742 0.8485768253551129 57 Smo410662 0.8472830374843918 45 Smo105805 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.8444101814528273 50 Smo150191 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana ATRDRP1, RDR1 0.8434711498558332 64 Smo128787 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component NYC1 0.8419494603088454 48 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.841423312012122 89 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8413622935154552 62 Smo419739 0.8409354482987975 51 Smo85224 0.8395544472013887 52 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.8347561746149921 68 Smo84597 0.8341310999939602 61 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8326621996846956 84 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.8326239752267863 57 Smo410507 0.8320333308529265 70 Smo10677 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138 0.8312310502942273 76 Smo442094 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8294524004636011 60 Smo406875 0.8290369197742538 62 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica BGLU40 0.8289105159805995 63 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1 0.8283231762851518 96 Smo79134 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8268305012901421 65 Smo73844 0.825686283478183 80 Smo84550 SH2 domain-containing protein A OS=Arabidopsis thaliana STATLA, ATSHA, SHA 0.8232029807625314 68 Smo77583 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1 0.8221905184284056 69 Smo412577 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.8203419126173284 71 Smo131108 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.8198898027487044 72 Smo172755 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase CRCK2 0.8194324310096678 73 Smo403442 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.8191380096343928 74 Smo109608 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8145259656062441 76 Smo103517 Phytohormones.gibberellin.synthesis.ent-kaurene oxidase KAO2, ATKAO2, CYP88A4 0.8141756218835113 77 Smo75780 DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana 0.8123232212609401 80 Smo88538 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88 0.8120679096616376 81 Smo444786 0.8118068649112764 87 Smo439207 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease 0.8102582004983585 85 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1 0.809716819504395 96 Smo443642 Primary amine oxidase OS=Pisum sativum 0.8075954283214519 90 Smo78627 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG25, ATXR7 0.8072925751648251 91 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8032794553637677 98 Smo42040 Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum 0.8024288669361471 99