Sequence Description Alias PCC hrr Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.9518716563817409 1 Smo145357 RNA processing.organelle machineries.ribonuclease activities.RNase R exoribonuclease RNR1, ATMTRNASEII, EMB2730 0.9497488282299644 2 Smo91982 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease 0.9406804801689834 3 Smo98591 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana 0.9364410513722586 4 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.9303476003821176 5 Smo77425 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase RIF10, PNP 0.9299468055483051 6 Smo146160 Solute transport.carrier-mediated transport.MC-type solute transporter SAMT1, SAMC1 0.9294810456160219 7 Smo85220 0.925710571079256 8 Smo79851 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2 0.9226766702367177 9 Smo415636 0.9225984137458947 10 Smo121150 0.9223313343368337 11 Smo445517 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.9214959859839196 12 Smo100125 Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana 0.9191641231537452 13 Smo90123 Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OTP84 0.918964834847307 14 Smo62387 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana 0.9189118749556069 15 Smo417312 Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana RSY3 0.9179662100555206 16 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.9173942390513267 17 Smo73828 Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana 0.9173050262839983 18 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.9169303886359799 19 Smo166436 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana EX1 0.9165054885845993 20 Smo10066 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana 0.9157864980797956 21 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH 0.9156519136894893 22 Smo181800 0.9138192470009674 23 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.9123771640270153 24 Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.9123065132524592 25 Smo442211 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761 0.9122020084705715 37 Smo405769 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana 0.9100671469771386 27 Smo438810 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.OTP51 splicing factor 0.9077652579350117 28 Smo105247 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.9075010269171668 29 Smo164801 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE 0.9071296509100971 30 Smo107344 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase 0.9070851023531025 31 Smo444770 Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana 0.9065638476828113 32 Smo440741 0.9049303046858654 33 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.9043625879387137 34 Smo410877 SPD1 0.9027466328137802 35 Smo118907 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana SKL2 0.9015193850447196 36 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.9008720442083186 37 Smo104811 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor PTB2, ATPTB2 0.8993233744752441 38 Smo442673 Nutrient uptake.iron uptake.iron storage.PIC-type iron transporter 0.8991463168539813 39 Smo3827 Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana 0.8988428742036786 40 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8970432417131967 41 Smo412905 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.8961227416855921 42 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.8958214109864958 43 Smo428281 0.8957766583371057 44 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8946714731153383 45 Smo81276 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.8945843027954021 46 Smo270732 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component RPL9 0.8942670210609414 47 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.8940530187245473 48 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8934497917860224 49 Smo86079 DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana RH39 0.8920951361964262 50 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312 0.8907207763040184 51 Smo115678 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex1 component PEX1 0.8903037546033512 65 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8878221830040243 53 Smo134189 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana EMB2758 0.8875119980318602 54 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.8861250650389606 55 Smo10002 Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana 0.8852508372681693 56 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8851756744163957 57 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8849238807569011 58 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase PPOX, HEMG1, PPO1 0.8845533630806094 59 Smo84012 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana 0.8838709321652942 60 Smo60327 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM 0.8837231395328569 61 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.8834478562280187 62 Smo166434 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana EMB1270 0.8821750126068935 63 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.880759427006745 64 Smo52887 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.8801394493017817 65 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.8798661239222295 66 Smo100308 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana DOT4 0.8796322641174191 67 Smo438142 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) GR, EMB2360, ATGR2 0.8795337814727491 68 Smo443180 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana PDE318 0.8788678611949993 69 Smo175826 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana 0.8770937475450047 70 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8770590570546116 71 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.876464152028633 72 Smo437286 0.8760398367753177 73 Smo437336 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.8759429158167197 88 Smo231207 Laccase-13 OS=Oryza sativa subsp. japonica LAC11 0.8756130303111155 75 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8747975009844989 77 Smo13541 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.MBD7 ROS1-recruitment complex.IDM2/IDM3 component 0.8738927758097754 78 Smo61000 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana 0.8738601012214816 79 Smo120007 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.873846785825701 80 Smo132867 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.bifunctional hydroxymethylpyrimidine kinase and thiamin-phosphate diphosphorylase (Th1) THIE, TH-1, TH1 0.8738353417030293 81 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.873779000436213 82 Smo440019 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase ISE2, PDE317, EMB25 0.8732681468264902 83 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.8730306383758254 84 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.8723067928813588 85 Smo437225 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN8 0.8721392473078411 92 Smo101391 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-e lycopene epsilon cyclase LUT2 0.8707422792730939 87 Smo439642 0.8706482185904324 88 Smo431844 OLI2 0.8705933586233394 89 Smo126882 Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana OTP82 0.8705673183891852 90 Smo92242 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.868667641649852 91 Smo134108 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8683285746282583 92 Smo103038 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase ATBXL2, BXL2 0.866292633228137 93 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase OVA6, PRORS1 0.865782243883336 94 Smo30615 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8653308263028839 95 Smo403998 0.8651484852503624 96 Smo233927 Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica 0.8648832357852985 97 Smo73714 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.8646638427013209 98 Smo75160 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8638831651195449 99 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8630634564961142 100