Sequence Description Alias PCC hrr Smo412574 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.9302743404172361 2 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.9156941862000361 2 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.9155952006293482 7 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.9142174825445979 14 Smo438810 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.OTP51 splicing factor 0.909694344432334 5 Smo83381 0.906184103798971 6 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.9025886968119323 23 Smo79402 0.8984188374965731 15 Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8980239588201738 15 Smo118724 0.8959233054008826 26 Smo103638 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.8957489159618373 11 Smo419405 0.894552724393171 12 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8939873535387026 18 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica CPSAR1, EMB269, ATOBGC 0.8921686424030544 18 Smo444770 Pentatricopeptide repeat-containing protein At3g15590, mitochondrial OS=Arabidopsis thaliana 0.8916446637069121 15 Smo439642 0.8899465604948401 42 Smo444048 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana 0.888464445102071 17 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.8870772868922667 44 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.8868728444147443 39 Smo405769 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana 0.8866164440045662 20 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8829684741711417 36 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8750658345356123 58 Smo89324 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) ATCNGC20, CNGC20, CNBT1 0.8717520751090877 23 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8706299471119314 54 Smo165421 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.8706095948743297 44 Smo448225 Ferredoxin-dependent glutamate synthase 2, chloroplastic OS=Arabidopsis thaliana GLU2 0.8693259792682274 26 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica BGLU40 0.8678038222599892 27 Smo429777 0.8661049225967885 28 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8658297617764283 29 Smo440019 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase ISE2, PDE317, EMB25 0.8657916237525926 30 Smo442872 0.8652098313679578 51 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) KEA1, ATKEA1 0.8624587028800693 76 Smo412577 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana ATRAP, RAP 0.8622656050945918 35 Smo407760 (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.8612675551264468 36 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH 0.8611589736322911 95 Smo79954 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.8608722746065923 38 Smo438142 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) GR, EMB2360, ATGR2 0.8601293125560755 97 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase PPOX, HEMG1, PPO1 0.8598797206973994 44 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.8580012047354907 62 Smo440762 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor ELF6 0.8574951220808178 43 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor emb2726 0.855380724648185 100 Smo441903 0.8546801668765416 46 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.8537561067719993 100 Smo98955 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana CRR22 0.8512562282968695 50 Smo141299 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.8492998023689472 51 Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.849145212543457 91 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.848752416853765 65 Smo73985 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana 0.8487015302896813 73 Smo99426 Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.8486203290931364 55 Smo412471 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM734 component 0.848585437402611 56 Smo95450 Protein PHLOEM PROTEIN 2-LIKE A10 OS=Arabidopsis thaliana CF9 0.8468868093258236 57 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.845749079733175 80 Smo102526 Fructose-1,6-bisphosphatase, chloroplastic OS=Brassica napus 0.8455152712888474 59 Smo89230 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana CRR22 0.8452020721823953 60 Smo423867 0.8452006852472567 61 Smo80247 RNA processing.ribonuclease activities.RNase P ribonuclease activities.protein-only RNase P PRORP1 0.843373685432793 65 Smo181997 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana AIR3 0.8421371274779803 67 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.8412595900722354 68 Smo409708 0.8412120676724931 69 Smo418519 0.8392801196042814 73 Smo404377 Protein TPR3 OS=Oryza sativa subsp. japonica TPR1 0.8382776584665372 76 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.837858559053677 83 Smo411217 Protein modification.acetylation.sirtuin-type lysine deacetylase SRT2, AtSRT2 0.8365758840917078 81 Smo438910 0.8355566413487845 83 Smo107734 Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana 0.8354926209667145 84 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.835222078182637 88 Smo416844 0.834485910210448 92 Smo160631 Protein biosynthesis.organelle translation machineries.plastidial ribosome.plastidial ribosome-associated proteins.ribosome biogenesis factor (PAC) PAC 0.834395277058294 90 Smo61162 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana 0.832698849874472 95 Smo266905 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 635.4) 0.8324953500265079 97 Smo419253 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.8323572406735942 99