Sequence Description Alias PCC hrr Smo440052 0.9425757638443198 9 Smo438348 Protein MEI2-like 5 OS=Arabidopsis thaliana AML5, ML5 0.9415736325969585 2 Smo79692 Protein RMD5 homolog OS=Arabidopsis thaliana 0.9300495986070456 3 Smo441325 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component 0.9300319207255359 4 Smo438861 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.9218853607137854 21 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.9156551653647252 37 Smo440912 0.9080614480782385 25 Smo144158 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507 0.9074606782753234 26 Smo410730 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.905394230659984 61 Smo441216 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component ATRPA70A, RPA1A, ATRPA1A, RPA70A 0.9049841728614045 34 Smo161477 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1 0.904961079603546 18 Smo70578 0.9033564133238258 87 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9028259344666878 77 Smo78344 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Prp17 component 0.9025387643616648 14 Smo438226 0.8998436842454209 15 Smo81360 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor MYB4R1, AtMYB4R1 0.8998199021318514 16 Smo110201 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS 0.8950395875675654 57 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8943925449932102 34 Smo446036 0.8939969174124132 20 Smo175932 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase BSL3 0.892375828787285 77 Smo410159 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein SMG7 0.892361601037294 58 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter COPT5 0.8921971790765633 65 Smo170207 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16 0.8920172289194125 24 Smo60241 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8904261736321741 60 Smo146155 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL3, KAK 0.8884399031413878 58 Smo98098 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione degradation.oxoprolinase OXP1 0.8878102570877939 36 Smo158150 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin 0.8864215266622203 31 Smo173646 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor 0.884142337099477 33 Smo30444 0.8827646951535957 35 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.8826488045856651 73 Smo413471 0.882353939496753 54 Smo181353 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB13, ATPUB13 0.8823349308436419 37 Smo40493 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase 0.882303927171124 63 Smo97324 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana PI4KBETA1, PI-4KBETA1 0.8822665128369795 87 Smo101375 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.8818717297601953 40 Smo156885 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG 0.8814798472040196 42 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.8781234197778732 56 Smo227606 DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.8775499401357879 44 Smo447098 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter ATEIN2, PIR2, EIN2, ERA3, ORE3, CKR1, ORE2 0.8771478532664078 66 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8771223359002374 89 Smo110523 DNAJ protein JJJ1 homolog OS=Arabidopsis thaliana 0.877109427346077 48 Smo172575 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component ftsh4 0.8766016288867343 69 Smo33558 Probable WRKY transcription factor 19 OS=Arabidopsis thaliana 0.8757273823591786 51 Smo14013 F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.8755869705369033 52 Smo179776 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBA-activating E1 protein UBA1, MOS5, ATUBA1 0.8751546940989919 53 Smo141341 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG 0.8741244540831413 54 Smo2133 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.874027425575053 56 Smo139408 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter PGP20 0.8737987356882304 58 Smo82212 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase ESP3, EMB2733 0.8737673356625654 59 Smo76597 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana 0.8733461386872311 60 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.8731854357342419 75 Smo235886 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component ABO1, ELO2 0.8709071781677347 96 Smo235391 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.8708382995296181 84 Smo411147 0.8706994841114771 65 Smo100267 0.8704804579458019 66 Smo437662 0.8698871384497184 68 Smo143427 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8697157014015423 84 Smo107792 0.8695092232967209 96 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976 0.8693508913186953 80 Smo1983 Pumilio homolog 1 OS=Arabidopsis thaliana APUM4, PUM4 0.8692582763143382 72 Smo232603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component 0.8692270019903319 73 Smo439915 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor TPR1 0.8688641854189784 74 Smo408760 0.8678737044966132 75 Smo437483 0.8674624882086246 76 Smo99910 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKG kinase 0.8668412469938549 78 Smo34638 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana REME1 0.8659300390270185 80 Smo428704 0.865615168593879 81 Smo230718 Nutrient uptake.sulfur assimilation.sulfate assimilation.sulfite reductase SIR 0.8636428475918688 82 Smo150347 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.electron input (module N).NQO1 component CI51 0.8633044181645805 84 Smo99084 Phytohormones.ethylene.synthesis.ETO-type regulator protein 0.8632485643814144 85 Smo439184 0.8619100341707507 88 Smo115864 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component SK21, ASK21 0.8617485032150819 89 Smo438753 0.8617289471285328 92 Smo444069 0.8615682985579025 92 Smo74297 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component 0.8612961918057722 93 Smo443944 Probable phosphoinositide phosphatase SAC9 OS=Arabidopsis thaliana SAC9 0.8605831791734642 94 Smo102403 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase RKF3 0.8593539640235907 98