Sequence Description Alias PCC hrr Smo186368 Protein modification.protein folding and quality control.N-glycan-dependent machinery.UGGT UDP-glucose glycoprotein glucosyltransferase EBS1, UGGT, PSL2 0.9772069473261501 1 Smo410613 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.9607912440269701 2 Smo444132 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.9560123828961339 7 Smo233936 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1 0.9499248257350801 4 Smo155996 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.9422990173175811 14 Smo142432 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.9404433332690247 6 Smo230275 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKC kinase CDKC2, CDKC;2 0.9396432675009269 8 Smo165735 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.9382418361498318 8 Smo76535 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica 0.9337803218733925 19 Smo266749 emb1441 0.9316235364934289 20 Smo172620 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.CUL4 scaffold component ATCUL4, CUL4 0.9312190822035109 11 Smo79168 0.9277024106318744 20 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana EMB2763 0.9251680092882216 33 Smo402573 0.9250355212665418 14 Smo96989 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component AtHPR1, AtTHO1, THO1, HPR1 0.9241407902922493 24 Smo117203 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9233753341214196 21 Smo60640 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9231543411967923 44 Smo42160 Alpha-galactosidase OS=Coffea arabica 0.921313107455111 18 Smo151152 UNE6 0.9212077135061225 19 Smo165037 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor HVE, TIP120, CAND1, ATCAND1, ETA2 0.920915274256608 37 Smo418782 0.9206332134168775 26 Smo165919 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I glucosidase I KNF, GCS1 0.9198819400605694 22 Smo54760 0.9195435638521026 23 Smo185811 MEE49 0.9191100900980069 24 Smo175495 ABC transporter F family member 3 OS=Arabidopsis thaliana GCN3, ATGCN3 0.9187281572682892 33 Smo177985 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.9186627570424659 69 Smo444302 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP12 0.9174637024839756 37 Smo64568 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.9170536051951823 44 Smo78845 0.9166869356774415 33 Smo446134 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.FIP37 regulatory component ATFIP37, FIP37 0.9164324263091729 30 Smo440320 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component 0.9157139805116749 31 Smo118632 0.9156839849637658 32 Smo96730 0.9145841295048495 33 Smo55167 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein 0.9133243001771768 40 Smo440815 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component CHR5 0.9132419584428215 44 Smo441016 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component ELF7 0.9128763806157214 60 Smo61333 0.9126102238820446 37 Smo230767 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.9116879017308022 38 Smo441095 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.9116050490613385 39 Smo145504 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase TOP1BETA, TOP1 0.9112345750947553 40 Smo444016 0.9107638628736404 43 Smo419685 0.9091105211797417 42 Smo444121 Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica 0.9089507063407279 43 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.9079995774897899 82 Smo411166 0.9079888890514352 45 Smo173394 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component AXR6, ATCUL1, CUL1 0.9067868913854956 46 Smo73493 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component 0.905529487844968 47 Smo230367 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.phosphorylation of eIF2-alpha.GCN1 kinase co-activator (ILITHYIA) ILA 0.9054331522263379 48 Smo175519 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin ATTRN1, TRN1 0.9050455788060502 59 Smo115849 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component ATCBP80, ABH1, ENS, CBP80 0.9046212949395043 51 Smo270172 0.9040223588642281 51 Smo107448 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.9036198690896845 52 Smo62607 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis thaliana 0.9035204920850582 53 Smo90148 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS41/VAM2 HOPS-specific component ATVPS41, ATVAM2, VPS41, ZIP2, VAM2 0.9025586094933136 54 Smo407112 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.9014678863855594 55 Smo148115 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor 0.9013167940124868 56 Smo139448 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.GCN5/ADA4 component BGT, GCN5, HAG1, HAG01, HAT1, HAC3 0.9012683240007353 57 Smo173175 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3 0.9010474960515918 58 Smo232336 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein VAN3, SFC, AGD3 0.9006552216588319 59 Smo416323 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) 0.9002979133341509 60 Smo402249 Zinc finger protein ZOP1 OS=Arabidopsis thaliana 0.8999488686340077 61 Smo232167 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana ATMAP65-1, MAP65-1 0.8999018803279009 62 Smo234951 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase SnRK3.12, PKS6, CIPK9 0.8995620289604604 63 Smo109541 Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana PRP39 0.8991821818503749 64 Smo50676 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PA-PLA1-type phospholipase A1 0.8989772348409871 65 Smo231975 Protein modification.phosphorylation.CK kinase superfamily.CKL protein kinase ckl12 0.8987652769091031 66 Smo405818 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component RAD50, ATRAD50 0.8973857005148016 67 Smo440812 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).RBM25 pre-mRNA splicing regulator 0.8968681809494918 68 Smo420594 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.8962681111690207 84 Smo77824 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP2-type dynamin DRP2A, ADL6 0.8951486063201233 71 Smo404232 SART-1 family protein DOT2 OS=Arabidopsis thaliana MDF, DOT2 0.8951162928713681 72 Smo80113 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase ALDH11A3 0.8946767240647927 73 Smo439529 0.8946147235474268 74 Smo75107 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8944455426669395 99 Smo102633 RNA processing.RNA modification.rRNA/tRNA methylation.TRM5 tRNA guanosine-methyltransferase 0.8944302614412994 76 Smo185753 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.KA120 import karyopherin 0.8941433199824754 77 Smo147068 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit XPB1, ATXPB1 0.8939959210314494 78 Smo439648 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C 0.8937956126128785 86 Smo439148 0.8935012112103474 80 Smo80688 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component VCL1, EMB258, MAN 0.8934320805844116 81 Smo96734 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst DEI1, PAS1 0.8930624256121162 82 Smo81560 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin 0.8927781012032715 83 Smo270432 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATPUB49, PUB49 0.8925157856158478 84 Smo139346 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1 0.8924190716086274 85 Smo446291 0.8922666804681727 86 Smo85336 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B2-type regulatory component 0.891938996242863 87 Smo443175 0.8915754811593216 89 Smo103102 0.8915554770542483 90 Smo79603 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.8907366657213217 92 Smo440209 0.8907252651056746 93 Smo437710 0.8906890959395912 94 Smo269116 Protein IWS1 homolog 1 OS=Arabidopsis thaliana ATIWS1, IWS1 0.8899886161403824 95 Smo156135 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease EMB2763 0.8899175130642586 96 Smo177444 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana 0.8897274430968535 97 Smo440060 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.889461271694072 98 Smo405955 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.88885702253055 99 Smo447293 0.8888498236995536 100