Sequence Description Alias PCC hrr Smo164801 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE 0.9378082208545258 6 Smo445517 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.9328412245403082 5 Smo120007 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.9288855235853307 3 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.9209310382959678 9 Smo85469 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) TAPX 0.918018288435811 9 Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.9169133435763563 11 Smo81276 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.9148809500552632 11 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.9120279666740881 8 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.9102664423685447 20 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.9067205214785861 10 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.9033690417490592 15 Smo91982 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease 0.9029610018605808 28 Smo186974 tRNA ligase 1 OS=Arabidopsis thaliana ATRNL, AtRLG1, RNL 0.9027466328137802 35 Smo52887 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.9024906965813427 21 Smo107335 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.ESV1 dikinase regulator 0.8969883253769484 15 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.8969336021104168 24 Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.8969296878541335 26 Smo166436 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana EX1 0.8935809131572241 29 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.8915779996801253 25 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8909440647140295 46 Smo98591 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana 0.8909412698041467 32 Smo412905 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.8889578905424965 22 Smo79851 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase OVA5, ATKRS-2 0.8879510578272147 37 Smo139232 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.8872237855782932 24 Smo231207 Laccase-13 OS=Oryza sativa subsp. japonica LAC11 0.8871395063237005 25 Smo415636 0.8853011852950414 43 Smo402586 0.8835067660286456 27 Smo177176 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8816232598091954 28 Smo165421 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.8815328661221502 29 Smo428281 0.8797539351844458 30 Smo181800 0.8797245756526709 91 Smo430632 0.8796420012863433 32 Smo439642 0.8793007535152263 59 Smo60327 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC6 component ATRAD18, SMC6B, MIM 0.8773385212501631 43 Smo121150 0.8768544739529918 50 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8737625774209733 36 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8737099889875444 49 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312 0.8734855143583806 55 Smo442087 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor 0.8716530973238048 39 Smo270732 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component RPL9 0.8714572496679225 40 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8697655564793554 50 Smo440741 0.8690496490655665 43 Smo115078 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana MRL1 0.8679395577084161 44 Smo417312 Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana RSY3 0.8665577734813529 73 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8660767680014216 57 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase OVA6, PRORS1 0.8649924490669387 48 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8648965566123771 76 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.8646081576954981 50 Smo74924 0.8639674453028802 51 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH 0.8633190019598836 91 Smo166434 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana EMB1270 0.8625880975572094 58 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8603037335142358 74 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.8600543507162827 88 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.8595552859712404 56 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8589210261031919 57 Smo270556 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8561795680483953 60 Smo122255 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase ATHRS1, HRS1 0.8560526323973101 61 Smo105247 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana 0.8560027811616446 74 Smo92083 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8546405787939517 75 Smo145357 RNA processing.organelle machineries.ribonuclease activities.RNase R exoribonuclease RNR1, ATMTRNASEII, EMB2730 0.8529466259450484 86 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8526082871890824 91 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8517113680581465 72 Smo441624 Aldo-keto reductase family 4 member C10 OS=Arabidopsis thaliana 0.8513743507217508 74 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8509215833554845 75 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.8506283406032499 84 Smo142036 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana 0.850035578762576 78 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.8493933627456716 79 Smo437721 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120 0.8474835216943957 81 Smo438810 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.OTP51 splicing factor 0.8463779936446076 82 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8463284259391867 83 Smo447302 0.8452612938480752 84 Smo56868 0.8445144407171702 86 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8443479796811494 87 Smo3827 Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana 0.8441612175779447 88 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8439124291155891 89 Smo424522 0.8425808435344008 96 Smo46232 Cell cycle.organelle machineries.DNA replication.RNA primer removal.plastidial exonuclease 0.8424287860164603 94 Smo10066 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana 0.8420763508319101 94 Smo85220 0.8418358849891265 95 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1 0.8417541843225751 96 Smo271611 Acetyltransferase NSI OS=Arabidopsis thaliana ATNSI, NSI 0.8415635377001153 97