Sequence Description Alias PCC hrr Smo67418 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 0.8681629325157401 2 Smo173372 0.8361795200182843 3 Smo233271 Cationic peroxidase 2 OS=Arachis hypogaea 0.8320185623517212 3 Smo54775 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade A phosphatase 0.8266230262196269 4 Smo99168 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic62 component 0.8255184823452544 6 Smo58662 RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component NF-YC2, ATHAP5B, HAP5B 0.8244835849285319 6 Smo17536 0.8197189732315051 7 Smo90331 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana EMB2261 0.8193285714206564 8 Smo47768 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8193270215853936 9 Smo65351 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component CLPR1, SVR2, NCLPP5 0.8082313177375996 53 Smo113855 EDA32 0.8046909396247733 11 Smo80646 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.8026026575522431 12 Smo38997 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor 0.7992787685469418 13 Smo74706 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana 0.7992581406366643 30 Smo67758 0.7979046595097572 64 Smo414701 0.7967677694430078 16 Smo36641 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component 0.7956980248952 17 Smo56766 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana 0.7910500021379443 29 Smo122991 0.7885555494488186 19 Smo406405 0.7872345699031568 20 Smo24892 RNA biosynthesis.transcriptional activation.bHLH transcription factor LRL1 0.7862848410818595 41 Smo80798 Cell wall.sporopollenin.synthesis.tetraketide alpha-pyrone reductase DRL1 0.7856894855184209 22 Smo49859 RNA biosynthesis.transcriptional activation.SBP transcription factor 0.7817878217395665 42 Smo91859 0.7800013849606475 24 Smo122474 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 0.7794423458851394 50 Smo23827 Solute transport.carrier-mediated transport.MC-type solute transporter 0.778438315853778 26 Smo68628 0.7766476079654399 27 Smo71410 Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica DRB2 0.775992468977088 33 Smo133317 Phytohormones.jasmonic acid.synthesis.allene oxidase synthase (AOS) CYP74A, DDE2, AOS 0.7738987520623135 29 Smo5521 Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana 0.771955172093212 81 Smo422101 0.7713116008246874 31 Smo112158 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana 0.7696863900946397 32 Smo421627 Lipid metabolism.lipid transport.plastidial lipid import.TGD5 lipid trafficking cofactor 0.7695535526227116 79 Smo421631 Lipid metabolism.lipid transport.plastidial lipid import.TGD5 lipid trafficking cofactor 0.7695535526227116 79 Smo26830 0.7688854680835241 35 Smo7007 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.ISU1/2/3 scaffold component 0.7671144949064348 37 Smo121021 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor TRFL2 0.7668198117284725 38 Smo8796 0.7647972825515856 40 Smo270367 BTB/POZ domain-containing protein At1g63850 OS=Arabidopsis thaliana 0.7644960369191406 78 Smo410562 NIP6, NIP6;1, NLM7 0.764418944683709 53 Smo72023 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.7641998140352708 43 Smo39013 Redox homeostasis.chloroplast redox homeostasis.X-type thioredoxin 0.7579759771987772 44 Smo122603 Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana WCRKC2 0.7576959137351368 45 Smo68340 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor STOP1 0.7561539357697529 46 Smo16324 Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.7534319113795338 47 Smo403560 0.7533127596090465 48 Smo133320 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.7531702742703273 49 Smo20225 Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana 0.7530265887766671 50 Smo68508 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor 0.7527043851643336 89 Smo72231 Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana 0.7494303428823423 53 Smo18694 0.7482094265477768 54 Smo8343 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SCL28/30/33 splicing factor 0.7466845766890876 55 Smo163842 Histidine kinase 3 OS=Arabidopsis thaliana ATCRE1, WOL, CRE1, AHK4, WOL1 0.7442602887533477 58 Smo49051 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component 0.743504699001403 67 Smo77487 Kinesin-like protein KIN-12D OS=Arabidopsis thaliana POK2 0.7408615877578146 60 Smo84841 Phospholipase A1-II 1 OS=Oryza sativa subsp. indica 0.7364063386230547 62 Smo18753 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase 0.7361604357746644 63 Smo96304 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.7358714925680936 64 Smo66841 0.7351200564941632 65 Smo444359 0.7325616993675421 67 Smo93705 Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia 0.7312959292122926 69 Smo410093 0.7285409097492247 74 Smo96308 Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana 0.727493420779183 75 Smo100501 Werner Syndrome-like exonuclease OS=Arabidopsis thaliana 0.7267853808038409 76 Smo438289 0.726037638663376 78 Smo16319 Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.7255924320183638 79 Smo66287 F-box protein At1g67340 OS=Arabidopsis thaliana 0.7251250573804692 80 Smo420272 Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana 0.7240633683162987 81 Smo72702 External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator 0.7232236843172943 82 Smo73732 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.7209375751026375 83 Smo78396 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.7203523431948006 84 Smo79245 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.7203523431948006 85 Smo9015 Splicing factor-like protein 1 OS=Arabidopsis thaliana 0.718298459973661 87 Smo100448 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana 0.7180530269564204 89 Smo131485 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.7174689137936713 90 Smo76873 Protein modification.phosphorylation.TKL kinase superfamily.LRR-V kinase 0.71726300392988 91 Smo405879 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana 0.7152539834463545 95 Smo82090 L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana 0.7117119286239454 98 Smo103597 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.7114621512855519 99 Smo431538 0.710142850971077 100