Sequence Description Alias PCC hrr Smo178863 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.9772069473261501 1 Smo410613 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.9604361717486499 2 Smo155996 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.9571852634234775 5 Smo444132 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin NUA, AtTPR 0.9543043573701993 10 Smo76535 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica 0.9542102178787311 5 Smo96989 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component AtHPR1, AtTHO1, THO1, HPR1 0.9540938556915468 6 Smo165735 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.9539783086835651 7 Smo446134 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.FIP37 regulatory component ATFIP37, FIP37 0.9482049651505973 8 Smo233936 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin XPO1A, HIT2, ATCRM1, XPO1, ATXPO1 0.9478572037890274 9 Smo402573 0.9447785435620921 10 Smo230275 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKC kinase CDKC2, CDKC;2 0.9417287718212948 11 Smo117203 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9375555185572074 12 Smo151152 UNE6 0.935263899538528 13 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana EMB2763 0.9347221134995628 16 Smo145504 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase TOP1BETA, TOP1 0.9308779443161959 18 Smo60640 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9307262810080339 25 Smo266749 emb1441 0.9300951064260079 23 Smo441095 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor CHR20, ATRX 0.9298249273870147 18 Smo172620 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.CUL4 scaffold component ATCUL4, CUL4 0.929522483459597 19 Smo185811 MEE49 0.9287604671988373 20 Smo441016 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component ELF7 0.9276373082457846 39 Smo54760 0.9274051686947087 22 Smo177985 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor PKL, GYM, CHR6, SSL2, CHD3 0.9258089870294332 45 Smo118632 0.9251871450726871 24 Smo234951 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase SnRK3.12, PKS6, CIPK9 0.9248485484980626 25 Smo79168 0.9245252519842625 33 Smo418782 0.9240430949329066 27 Smo64568 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.9235259399229583 30 Smo55167 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein 0.9228333092147106 29 Smo444016 0.9218299146116021 30 Smo175495 ABC transporter F family member 3 OS=Arabidopsis thaliana GCN3, ATGCN3 0.9216992404527864 31 Smo142432 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.9211969410956531 32 Smo78845 0.9211431342264907 33 Smo444302 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP12 0.9204945920520775 34 Smo61333 0.9192851706528077 35 Smo80113 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase ALDH11A3 0.9180753752481624 36 Smo115849 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component ATCBP80, ABH1, ENS, CBP80 0.9175320586093846 37 Smo173394 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component AXR6, ATCUL1, CUL1 0.917408163954925 38 Smo73493 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component 0.9173057272921973 39 Smo270172 0.9169607016568969 40 Smo165037 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor HVE, TIP120, CAND1, ATCAND1, ETA2 0.916949541898743 49 Smo405818 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component RAD50, ATRAD50 0.9158556810857363 42 Smo232336 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein VAN3, SFC, AGD3 0.9152202997866323 43 Smo173175 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3 0.9151117880947842 44 Smo230767 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.9147837378753862 45 Smo407112 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.9145112873826134 46 Smo230367 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.phosphorylation of eIF2-alpha.GCN1 kinase co-activator (ILITHYIA) ILA 0.9143081933288854 47 Smo96730 0.9140296029487532 48 Smo80688 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component VCL1, EMB258, MAN 0.9121604459016084 49 Smo416323 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) 0.9116174050383028 50 Smo440812 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).RBM25 pre-mRNA splicing regulator 0.910614840837099 51 Smo440320 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component 0.9098135722924874 52 Smo139346 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii LRS1 0.9094680894521566 53 Smo405955 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.9094607848200154 54 Smo440815 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component CHR5 0.9092795499761249 55 Smo109541 Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana PRP39 0.9086169720196844 56 Smo81560 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin 0.9085431246977045 57 Smo446291 0.9080837567125573 58 Smo79603 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.9079858519791825 59 Smo90549 DNA repair endonuclease UVH1 OS=Arabidopsis thaliana UVH1, ATRAD1, RAD1 0.9072105208580268 60 Smo103102 0.9070626148191824 61 Smo42160 Alpha-galactosidase OS=Coffea arabica 0.906625062768466 62 Smo139448 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.GCN5/ADA4 component BGT, GCN5, HAG1, HAG01, HAT1, HAC3 0.9061896292983856 63 Smo114128 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIe basal transcription factor complex.alpha subunit 0.9057103903977389 64 Smo165919 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I glucosidase I KNF, GCS1 0.9053876303013184 65 Smo90148 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS41/VAM2 HOPS-specific component ATVPS41, ATVAM2, VPS41, ZIP2, VAM2 0.9047482941080041 66 Smo411166 0.904737785603302 67 Smo169951 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.9045869409560884 68 Smo85336 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B2-type regulatory component 0.9040265953976486 69 Smo402249 Zinc finger protein ZOP1 OS=Arabidopsis thaliana 0.9039522531121501 70 Smo113277 0.9037859505754015 71 Smo77824 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV plasma membrane detachment.DRP2-type dynamin DRP2A, ADL6 0.9036281814544207 72 Smo84140 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst CYP59, ATCYP59 0.9030227016613576 73 Smo444121 Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica 0.9030128922484828 74 Smo148115 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor 0.9024623136730023 75 Smo175519 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin ATTRN1, TRN1 0.9022541976008063 76 Smo420594 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor ATALY3, ALY3 0.9020895358818161 77 Smo404232 SART-1 family protein DOT2 OS=Arabidopsis thaliana MDF, DOT2 0.9018891043765178 78 Smo420495 0.9018403404411612 79 Smo174036 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component SMC5 0.9011301765863787 80 Smo109857 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.9006320668514429 81 Smo147068 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit XPB1, ATXPB1 0.9001226878273716 82 Smo107448 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.9000689452529851 83 Smo75107 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8999370437904117 84 Smo270432 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ATPUB49, PUB49 0.899605294185764 85 Smo268301 Protein modification.N-linked glycosylation.complex N-glycan maturation.GnT-I-type N-acetylglucosamine transferase GNTI, CGL1, CGL 0.8994575086316187 86 Smo419685 0.899325194942575 87 Smo443175 0.8987081177559143 88 Smo439648 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein ATPRP40C, PRP40C 0.8984232699396666 89 Smo447293 0.8983818668092372 90 Smo168147 Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase(50.5.4 : 315.7) & Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic OS=Arabidopsis thaliana 0.8983271824743115 91 Smo150343 Solute transport.carrier-mediated transport.APC superfamily.CCC cation:chloride co-transporter CCC1, ATCCC1, HAP5 0.8973839748315682 92 Smo429283 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-4 motor protein FRA1 0.8971273336839363 94 Smo232167 65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana ATMAP65-1, MAP65-1 0.8967666443125311 95 Smo444397 0.896559032651462 96 Smo269116 Protein IWS1 homolog 1 OS=Arabidopsis thaliana ATIWS1, IWS1 0.896500619985301 97 Smo164635 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component ATX3, SDG14 0.896090662345179 98 Smo444049 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.89563263344552 99 Smo111607 0.8952242019475212 100