Sequence Description Alias PCC hrr Smo84597 0.9638163535644125 1 Smo75478 Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana 0.9414230917572428 2 Smo445274 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst FKBP62, ROF1, ATFKBP62 0.9359845951111244 9 Smo410507 0.9356986336703229 4 Smo406591 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor 0.9251850198026175 5 Smo439181 0.9194996653301384 17 Smo10677 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138 0.9194778096813425 15 Smo407040 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8 0.9159571718106122 8 Smo410377 0.911165293826081 9 Smo152730 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.9063169464339987 18 Smo413357 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.905951661007938 11 Smo167572 Nutrient uptake.sulfur assimilation.sulfate assimilation.(P)APS reductase ATAPR3, PRH26, PRH-26, APR3 0.9050542146307038 12 Smo128787 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component NYC1 0.9024395964394735 13 Smo438131 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana 0.90190725501439 14 Smo443419 0.8998284765149714 26 Smo441564 ACD31.2, ACD32.1 0.8980769443286787 16 Smo150329 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana AIR3 0.8976021401524831 17 Smo418436 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8953711797295973 18 Smo120890 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8921806980281616 19 Smo60423 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.8914314434607525 20 Smo447716 0.8895435717412399 32 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP 0.8884132774983725 46 Smo98813 0.8869635417255672 23 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.8851192961937918 38 Smo173093 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana 0.8802614242919491 25 Smo88538 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88 0.8797080629428831 26 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.877963539925462 59 Smo438182 0.8760242062070867 30 Smo439207 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease 0.8712100443146976 29 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.8699952957592944 56 Smo425390 0.8689648934792926 37 Smo72682 Multi-process regulation.circadian clock.evening element regulation.REVEILLE clock factor 0.8689096099336189 32 Smo405512 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component 0.8676164037065222 35 Smo77541 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana 0.8644865741256597 49 Smo418465 0.8620802015570489 62 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8603121851492886 64 Smo441971 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB 0.8548150033871083 37 Smo437639 0.8544129558315323 38 Smo184206 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic alpha-glucan phosphorylase 0.8542154247435602 39 Smo164116 0.8540050215400691 43 Smo170091 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase SQD2 0.853093303688266 57 Smo444139 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.FNR regulation.LIR1 protein 0.8515717382747039 42 Smo99603 DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica emb1138 0.8490191377110112 43 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8483947323967244 57 Smo96554 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.CTP synthetase emb2742 0.8475446276231218 59 Smo140066 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.GIGANTEA regulator protein GI, FB 0.8452070124422235 46 Smo130301 0.8442700673621912 47 Smo267688 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 435.6) & Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica CAD1, ATCAD1 0.843289682560317 48 Smo444786 0.8416567528309808 65 Smo410819 0.841342671105522 50 Smo271002 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) TZ, THI4, THI1 0.8399937721539561 52 Smo159064 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein EDA3 0.8395024690002264 53 Smo77583 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1 0.8355024211673574 54 Smo101296 Solute transport.carrier-mediated transport.MFS superfamily.NTT ATP:ADP antiporter NTT1, ATNTT1 0.8318666602465565 55 Smo405784 Cell cycle.organelle machineries.DNA replication.DNA gyrase complex.subunit B GYRB2 0.8315022232119246 56 Smo170457 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 134.6) 0.8304586800606258 83 Smo419739 0.8300522183529558 58 Smo141109 0.8297875235060717 70 Smo78627 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG25, ATXR7 0.8275760432379088 60 Smo423505 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor 0.8201302717349982 70 Smo447679 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8194975311151012 62 Smo143057 0.8191380096343928 74 Smo112220 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8169853844271102 64 Smo112145 Photosynthesis.photophosphorylation.chlororespiration.PTOX terminal oxidase 0.8131715567419349 67 Smo73844 0.8128454904752344 97 Smo90954 Coenzyme metabolism.tetrahydrofolate synthesis.dihydrofolate synthetase GLA1, EMB9, DFA, ATDFA 0.8105588424429929 70 Smo448001 0.8066901075518742 73 Smo99402 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component CCB1 0.8061007335838223 74 Smo404930 0.7999573228071827 75 Smo89033 Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.7965811888409611 76 Smo177641 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.thiamin monophosphate phosphatase (Th2) 0.7964363916443791 77 Smo120349 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component GATB 0.7950725899884782 84 Smo440420 0.7942331400183398 79 Smo422763 0.793848214107387 80 Smo141010 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor COL3, ATCOL3 0.7922882748800238 84 Smo178515 Peptide methionine sulfoxide reductase OS=Lactuca sativa PMSR4 0.7898815862773881 86 Smo102386 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.784816375947229 89 Smo67262 Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica ATCDSP32, CDSP32 0.7839013745162252 90 Smo443467 0.7782055662297207 93 Smo230417 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.MPE1 component 0.7777572150051599 94