Sequence Description Alias PCC hrr Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.952972363343457 1 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9397847919494655 2 Smo429547 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.9392070648641193 3 Smo410333 0.9357964462452428 4 Smo31929 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana 0.9235390686995795 8 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana EMB2083 0.9226316593478452 6 Smo99919 0.9204501534418158 7 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.9121712618026196 9 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.9115471770962064 18 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica ATNOA1, ATNOS1, RIF1, NOS1, NOA1 0.9104795455192779 10 Smo418519 0.9101145865930276 11 Smo442211 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase EMB2761 0.9090391925408986 46 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.9074335411346222 13 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9070629996240218 25 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATATM1, ATM1 0.9057649448670019 15 Smo79275 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor LUG, RON2 0.9041990978183778 16 Smo416844 0.9018506784921527 17 Smo428406 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component ATEME1B, EME1B 0.8968305404197858 33 Smo437976 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8966628580327092 49 Smo439163 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1 0.8956267494934803 26 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.8947832894350197 48 Smo442872 0.8940452423393407 27 Smo175555 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase HUB2 0.8939370630300918 100 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8934878510210529 24 Smo406615 0.8929855124020302 60 Smo167519 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8926120889709994 26 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8917742644844272 27 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8907428326807143 28 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.8882006145685897 29 Smo444048 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana 0.8881251209851598 30 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1 0.8880021081987286 31 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8864613999118925 32 Smo109207 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase TOP1BETA, TOP1 0.8863963609515584 38 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8846499662200077 34 Smo174109 ATPase ARSA1 OS=Chlamydomonas reinhardtii 0.8832666056228448 35 Smo141299 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.8814427961406833 37 Smo20706 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays EMB1865 0.8811403731086231 53 Smo438910 0.8784479558604541 39 Smo430219 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component ATEME1B, EME1B 0.8750446373901197 86 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.874281287366063 41 Smo163635 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component 0.8737503340187948 61 Smo146755 0.8733868463197428 43 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8726603947146392 44 Smo132867 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.bifunctional hydroxymethylpyrimidine kinase and thiamin-phosphate diphosphorylase (Th1) THIE, TH-1, TH1 0.8722102545891298 45 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8709998211051925 46 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8708303208668438 58 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8695488699433942 48 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8687694833657108 51 Smo442725 0.8676324464186408 50 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.8670678071566906 51 Smo439642 0.8661840938457028 93 Smo31884 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component 0.8651989013532108 53 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component FTSH12, EMB36, EMB156, EMB1047 0.8651360670038832 71 Smo79402 0.8637681083935355 61 Smo98591 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana 0.8626520635474291 97 Smo429777 0.8611515550100044 63 Smo80394 0.8605397299606324 65 Smo228404 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.LSG1 GTPase assembly factor 0.8604479196515233 66 Smo148418 0.8598505763747955 68 Smo409804 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.8587055219424127 78 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.8573667799404611 71 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8569047161065226 85 Smo96586 0.8563587544924003 73 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.8562477706859551 74 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.8551382096904107 76 Smo230648 Solute transport.carrier-mediated transport.CPA superfamily.CPA-1 family.proton:sodium cation antiporter (NHX-type) NHX2, ATNHX2 0.8549589960490466 77 Smo62387 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana 0.8541589221274667 78 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.8540771011974415 80 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP POLGAMMA2 0.8521397273770751 81 Smo413675 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana 0.8520500407104525 97 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica BGLU40 0.8520208472180187 83 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.849466432169325 96 Smo413123 RAP domain-containing protein, chloroplastic OS=Oryza sativa subsp. japonica ATRAP, RAP 0.849145212543457 91 Smo74924 0.8460953128687361 94 Smo437286 0.8458947437237131 95 Smo45172 RNA processing.RNA modification.pseudouridylation.RsuA-type rRNA pseudouridine synthase SVR1 0.8440511588048075 97 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana FTSH12, EMB36, EMB156, EMB1047 0.8438150984824256 98 Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.8428520979374707 100