Sequence Description Alias PCC hrr Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.9435978025763274 2 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.9314206084702507 6 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana SRS2, ATSRS2 0.9262813741691078 4 Smo110000 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.923370136515819 4 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase G6PD2 0.9195066739305381 10 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana ATGCN5, GCN5 0.9138875497603883 13 Smo73428 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma ATPC1 0.9132889502208569 7 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.9114478103851428 8 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase SYCO ARATH 0.9108956016392458 18 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase PPOX, HEMG1, PPO1 0.9029198652999336 10 Smo177574 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL15 component RPL15 0.9016887258315681 11 Smo442013 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana 0.9011419665480127 12 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.9005580411511425 33 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.8979014504977925 17 Smo440741 0.8974589507202816 15 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.896332503591133 16 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8956957032905888 24 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica CPSAR1, EMB269, ATOBGC 0.8955779455140817 18 Smo30996 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor 0.894492414056495 19 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8926277227365522 20 Smo142751 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.8875580467490717 21 Smo270732 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL9 component RPL9 0.886090044780744 26 Smo74924 0.8839506103393102 32 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.88316482433286 42 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V 0.8825957708909216 42 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.8818670366088477 36 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8816123679503303 43 Smo103638 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.8815282555371102 28 Smo439533 0.8801499820837556 29 Smo146755 0.8800844417222402 34 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8785788796793491 31 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana TIC55-IV, ACD1-LIKE, PTC52 0.878565015234649 32 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.8771118683109531 41 Smo73714 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.8761381410649809 34 Smo92083 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8753216096155938 48 Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum PDS3, PDS, PDE226 0.8750915015498401 72 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8739460337333324 48 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8721944964605067 43 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.8689237966537985 47 Smo103361 0.8686836492991268 50 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component RPS1, ARRPS1 0.8677668231049079 63 Smo141299 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.8674721099859946 42 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8666665600074905 47 Smo118724 0.8665912540446211 75 Smo57383 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component 0.8659277121308643 45 Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8655052335348438 46 Smo62387 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana 0.8653306160578021 47 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.8649731163953738 50 Smo63596 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana 0.8644793884067355 49 Smo43111 DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana ISE1, EMB1586 0.8630878495216234 50 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8622306372761519 56 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase OVA2 0.8608634820585416 52 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.8606565995815079 77 Smo437607 Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thaliana 0.8595815893470056 54 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor FUG1 0.858418140680862 59 Smo95494 0.8581842526728677 56 Smo77425 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase RIF10, PNP 0.8569751637188899 98 Smo174109 ATPase ARSA1 OS=Chlamydomonas reinhardtii 0.8561211456244563 59 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPB 0.8561190031480621 60 Smo81276 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.8557142502704149 83 Smo144149 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana 0.8556813705391484 62 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component CLP2, CLPR2, NCLPP2 0.8539623842131896 64 Smo444102 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 0.8538373430173819 65 Smo80479 Nucleotide metabolism.purines.catabolism.ureidoglycolate amidohydrolase ATAAH-2, UAH 0.8530480120091328 66 Smo79954 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.8526098011343727 67 Smo76023 UPF0235 protein At5g63440 OS=Arabidopsis thaliana 0.8508964992528543 69 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC 0.8502167195854583 71 Smo437596 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC7 component 0.8498759274420548 73 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.849401456673147 75 Smo85565 0.8493282662532489 76 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component PTAC5 0.8485213499788646 77 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.8478018415215994 78 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component PGR5-LIKE A 0.8477678659999144 79 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component SECA1, AtcpSecA, AGY1 0.8472998428728884 80 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter ATATM1, ATM1 0.8472120255072813 81 Smo438672 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.8460920689350259 83 Smo65804 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8459552366346333 84 Smo75269 Uncharacterized protein At1g26090, chloroplastic OS=Arabidopsis thaliana 0.8456969231677322 85 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1 0.8455846502103715 86 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.8454819229749712 87 Smo102624 0.8451236479059232 88 Smo85469 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) TAPX 0.8442174023846599 89 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.8439361137020456 91 Smo413416 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana FZL 0.8437693584147675 92 Smo411435 0.8436779224606419 93 Smo99426 Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.843449658081805 94 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.8429762665790032 95 Smo173467 Phytohormones.strigolactone.synthesis.DWARF27 biosynthesis protein 0.8424118682866593 96 Smo103038 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional BXL-type alpha-L-arabinofuranosidase and beta-D-xylosidase ATBXL2, BXL2 0.8415715362931959 97 Smo75294 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 crr1 0.8412208597170534 99 Smo227735 Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.copper/zinc superoxide dismutase CZSOD2, CSD2 0.8410087405020418 100