Sequence Description Alias PCC hrr Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.9538057348846434 1 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase ETFQO 0.9375905036471576 8 Smo164635 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component ATX3, SDG14 0.9315955721816611 3 Smo88186 0.9281673972449959 4 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL6 0.9279625115964395 28 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase BGAL8 0.9271379893924572 6 Smo139482 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.9265231098089171 12 Smo90313 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.9247261631433673 8 Smo442688 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component ESP4 0.924194349006879 9 Smo84957 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.HDA9 component HDA09, HDA9 0.9208583655296522 10 Smo148107 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 EMB1989, RPB2, NRPB2 0.9202420004170243 15 Smo270356 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.tRNA adenine-N6-methyltransferase 0.9202418307558202 12 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.9192790680668447 56 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana EMB2763 0.9191904577462435 41 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9188893623986255 23 Smo441144 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.9179264948373728 16 Smo420048 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP18 0.917249605215729 17 Smo176627 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component SECA2 0.9143842244125956 27 Smo159012 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SPY O-fucosyltransferase SPY 0.9131725527040765 19 Smo64568 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.9104002563277565 64 Smo85961 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.9094969088256512 34 Smo443671 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana 0.9087233309204256 58 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9086494526769039 68 Smo100977 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter 0.908636025183877 24 Smo413509 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component TOR 0.908397567637734 34 Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor HAC12 0.9082922911596562 69 Smo180454 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase ARI8, ATARI8 0.9069490522380814 27 Smo103506 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.BSK1 kinase 0.9059952898057798 28 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.9048879706114895 62 Smo440463 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.9048405870432255 30 Smo99756 Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana 0.9041105779853994 41 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP 0.9036927957711488 98 Smo86139 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component 0.9025143190462761 74 Smo447032 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP12 0.9018364945034615 50 Smo111871 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex6 component PEX6 0.9016644957185123 35 Smo79168 0.9014846368330472 85 Smo407112 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.9011865695791444 40 Smo10731 Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase 0.9011348026218222 38 Smo88336 0.9008250356856115 74 Smo402018 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana SUA 0.9002121664406367 40 Smo105976 0.9002093284600441 41 Smo410248 Protein EMSY-LIKE 1 OS=Arabidopsis thaliana 0.8988312834376123 42 Smo81471 Protein degradation.peptidase families.metallopeptidase activities.carboxypeptidase activities.M28 carboxypeptidase 0.8979081685143078 43 Smo175519 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin ATTRN1, TRN1 0.8970862855820806 85 Smo109501 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana AAE17 0.8969957708510199 46 Smo114128 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIe basal transcription factor complex.alpha subunit 0.8960377381255374 47 Smo267064 Nutrient uptake.nitrogen assimilation.glutamate deamination.glutamate dehydrogenase 0.895255986799288 49 Smo131582 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.8928295425023977 50 Smo80006 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VIII kinase families.RLCK-VIII kinase 0.8926051856359121 51 Smo115108 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.PRL1/MAC2 component 0.8924162491847671 52 Smo266713 Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP-type) ATTIP2;1, TIP2;1, DELTA-TIP, DELTA-TIP1, AQP1 0.8921307898510124 54 Smo74857 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease TPP2 0.8921296897345526 55 Smo437336 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.8920357100348327 56 Smo168303 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica 0.8920147459291498 57 Smo437693 0.891830533896554 58 Smo445651 0.8908110525704995 59 Smo415212 G2484-1, ATG2484-1 0.8906682425179815 96 Smo165735 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.8906409389854036 77 Smo164653 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component FTSH11 0.8905326030838551 62 Smo438037 0.8895632228383183 64 Smo139448 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.GCN5/ADA4 component BGT, GCN5, HAG1, HAG01, HAT1, HAC3 0.8894854985927371 65 Smo269807 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.8894683991219311 66 Smo182539 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component 0.8893746348997913 67 Smo232856 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta ERA1, ATFTB, WIG 0.8892362473137685 69 Smo413445 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase 0.8891166957378384 70 Smo167789 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component ftsh9 0.888811833920263 72 Smo446942 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.8883508008516171 75 Smo173603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14 0.8883098336196247 92 Smo107448 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.8880600366085595 85 Smo122175 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ECA P2A-type calcium cation-transporting ATPase ECA3, ATECA3 0.8874601798374284 76 Smo177376 Short integuments 2, mitochondrial OS=Arabidopsis thaliana 0.8871110394895633 77 Smo270348 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component 0.8864362097748727 78 Smo449066 TITAN-like protein OS=Arabidopsis thaliana 0.8849646322392661 79 Smo111860 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component CLF, SET1, ICU1, SDG1 0.884808580896626 80 Smo129262 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor 0.884657240314976 81 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8839273806696607 82 Smo440913 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin SCC2, ATSCC2, EMB2773 0.8831619451179313 97 Smo437272 0.883033101930102 84 Smo79650 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase HEN2 0.8830109586811216 85 Smo173762 Phytohormones.abscisic acid.synthesis.ABA3 xanthoxin oxidase molybdenum cofactor sulfurase SIR3, ACI2, LOS5, ABA3, ATABA3 0.8829891909291925 86 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter COPT5 0.8829630235805058 87 Smo440240 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M1 neutral/aromatic-hydroxyl amino acid aminopeptidase 0.8818549345127435 88 Smo403203 ATDJC39, ARL2 0.8816272607484673 89 Smo73493 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component 0.8811967669322706 90 Smo90560 DNA damage response.DNA repair polymerase activities.DNA polymerase eta (POLH) POLH 0.8808908953562098 91 Smo92193 0.8808744053611346 92 Smo448444 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.8796439189375616 93 Smo440558 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKL, GYM, CHR6, SSL2, CHD3 0.8795035754093344 94 Smo2719 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP23 0.8795013766868124 95 Smo272178 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor 0.8794715380811738 96 Smo439149 0.8791604887226931 98 Smo115678 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex1 component PEX1 0.8788130403149589 99