Sequence Description Alias PCC hrr Smo164116 0.9523758413150284 2 Smo73844 0.9493976213959604 2 Smo58058 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.9432786103359111 3 Smo98813 0.9428180103441672 4 Smo447716 0.9260000804485032 12 Smo444786 0.925551759709174 8 Smo419739 0.9111925961540907 7 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.9102187554903239 16 Smo414066 0.9091385313034882 9 Smo152730 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.9084833811557158 15 Smo438182 0.9045299601358464 14 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.9000051311736768 27 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8999125613961969 30 Smo438080 Solute transport.carrier-mediated transport.MFS superfamily.NRT1/PTR anion transporter ATPTR2, PTR2, PTR2-B, ATPTR2-B, NTR1 0.8985532473229939 14 Smo84597 0.8971265358525135 16 Smo162354 UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana AtUGT85A7, UGT85A7 0.89691700172346 16 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.8954491034891736 30 Smo445274 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst FKBP62, ROF1, ATFKBP62 0.8952129402271938 27 Smo85072 Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana 0.8918636542074325 19 Smo10677 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor emb1138 0.8916070236516761 33 Smo437639 0.8914658651146262 21 Smo96554 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.CTP synthetase emb2742 0.891279150779107 22 Smo84550 SH2 domain-containing protein A OS=Arabidopsis thaliana STATLA, ATSHA, SHA 0.8900370859110399 23 Smo416844 0.8899553227144373 25 Smo442385 Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana 0.8899354732524781 25 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP 0.8844222007862913 50 Smo441564 ACD31.2, ACD32.1 0.8799322551655908 27 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.8799105311774362 39 Smo120890 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8766072555970554 29 Smo410662 0.8747918013982469 30 Smo418465 0.8743965695387163 48 Smo105356 Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana 0.8737141756258411 32 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.87158833772815 33 Smo440949 RNA biosynthesis.transcriptional activation.BBR/BPC transcription factor BPC3, ATBPC3 0.8713079760684415 34 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8710101340832554 35 Smo271002 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) TZ, THI4, THI1 0.8705060847135204 36 Smo143057 0.8677728020177858 37 Smo150329 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana AIR3 0.8665642221245294 43 Smo141010 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor COL3, ATCOL3 0.8664676151771392 39 Smo442094 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8659583553321796 40 Smo442088 Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana CRR22 0.8653246199944866 41 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8644444787144034 69 Smo141109 0.8623922791493757 44 Smo140066 External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.GIGANTEA regulator protein GI, FB 0.8623735682324354 44 Smo89033 Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica 0.8622838620332551 45 Smo447679 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8608385313409951 46 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8606110274340056 63 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8602808096064561 62 Smo422148 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8595139012451786 49 Smo60423 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.8594702556984262 50 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8570336734083879 51 Smo421525 Peroxidase 4 OS=Vitis vinifera PA2, ATPA2 0.8567521961610088 52 Smo130412 OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana 0.8554889364098329 53 Smo79134 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8549217809579917 54 Smo61778 0.8544156794067894 55 Smo99402 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component CCB1 0.8539398200340804 56 Smo403442 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.853093303688266 57 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.8530352093640392 58 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8525092501261757 59 Smo410507 0.8495714453529951 60 Smo439207 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease 0.8495052583147126 61 Smo406591 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor 0.8494316477487756 62 Smo230417 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.MPE1 component 0.848693007492833 63 Smo117919 Carbohydrate metabolism.sucrose metabolism.degradation.hexokinase ATHXK1, HXK1, GIN2 0.8475788568396745 64 Smo67262 Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza sativa subsp. japonica ATCDSP32, CDSP32 0.8472688522729859 65 Smo425390 0.8472425394286918 66 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.8463357325295153 67 Smo440420 0.8456692004612896 68 Smo159064 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein EDA3 0.8450535501575898 69 Smo85032 Alpha-galactosidase 3 OS=Arabidopsis thaliana 0.8437324997173741 70 Smo410868 0.8392743275660758 71 Smo11287 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.NCED carotenoid cleavage dioxygenase 0.8382489746408966 72 Smo184206 Carbohydrate metabolism.starch metabolism.degradation.maltose metabolism.cytosolic alpha-glucan phosphorylase 0.8381607632495254 73 Smo103638 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.8379593007339838 74 Smo85806 F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana 0.8372423445884449 75 Smo96082 0.8370932318122393 76 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8362138856024716 97 Smo178515 Peptide methionine sulfoxide reductase OS=Lactuca sativa PMSR4 0.8344199711700374 79 Smo418436 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) THIC, PY 0.8340307402278182 80 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica BGLU40 0.8339887103661047 81 Smo407040 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease DEGP8, DEG8 0.8329736188066545 82 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8319133562555661 86 Smo172755 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase CRCK2 0.8315347734581451 84 Smo409941 0.8309912064942797 85 Smo430412 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8308468362490933 86 Smo229182 Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum 0.8296291775737669 87 Smo99603 DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica emb1138 0.8296211529563827 88 Smo74506 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana 0.8286546959596057 89 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.8274492553869434 91 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1 0.8271180388487497 100 Smo42040 Translocon at the outer membrane of chloroplasts 64 OS=Pisum sativum 0.8267536242845834 92 Smo101296 Solute transport.carrier-mediated transport.MFS superfamily.NTT ATP:ADP antiporter NTT1, ATNTT1 0.8267335567509587 93 Smo443419 0.8263869900996862 94 Smo70744 RNA biosynthesis.transcriptional activation.GRAS transcription factor 0.8263458618125048 95 Smo35365 Probable serine/threonine-protein kinase PIX7 OS=Arabidopsis thaliana 0.8247025884524947 96 Smo78627 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG25, ATXR7 0.8229748551456904 97 Smo439181 0.8226612861547042 98 Smo443467 0.8210215838155793 99