Sequence Description Alias PCC hrr Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.964221245412351 1 Smo105805 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.9381809210140226 2 Smo442087 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor 0.9279717593978303 3 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.9191835353516078 11 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.9177967111844103 13 Smo103517 Phytohormones.gibberellin.synthesis.ent-kaurene oxidase KAO2, ATKAO2, CYP88A4 0.9162768719183663 6 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase QPT 0.9104953841225104 7 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9084526943511518 23 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.9069578011239937 17 Smo122255 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase ATHRS1, HRS1 0.9068515995636476 10 Smo84658 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase HAM1 0.906426690093619 13 Smo410009 0.8982498004546187 12 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein PTAC4, VIPP1 0.895203862919347 27 Smo110335 Cell wall.pectin.modification and degradation.pectin acetylesterase 0.8909162248872043 14 Smo419047 0.8901423293252276 35 Smo422020 0.8894277814487802 19 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.887840487349132 40 Smo411205 DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.8850572303659051 50 Smo164801 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE 0.8744456606177338 66 Smo420490 0.8740595484611012 20 Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.8733324381207357 69 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8718888081420323 37 Smo84657 Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OTP82 0.871182170751715 23 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component PTAC10, PDE312 0.8703488264283167 60 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome ATPREP1, PREP1, ATZNMP 0.8680058650508555 64 Smo403334 DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) 0.8675325731015986 28 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase PDE181, ZDS, SPC1 0.8600522068899865 27 Smo408862 0.860017719832192 28 Smo437721 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component TIC40, ATTIC40, PDE120 0.8595738238300612 52 Smo439153 0.8591058865959319 81 Smo409261 0.8563472794802023 52 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8559225500184148 47 Smo42776 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.AAAP-type transporter 0.8545662828984949 35 Smo444321 0.8538538088199652 36 Smo443419 0.8532058063945058 62 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein CPN60B, LEN1 0.852145779352296 67 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.8496146466306486 95 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.8482160289616142 83 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component APRR1, AtTOC1, TOC1, PRR1 0.8472372990024825 42 Smo423505 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor 0.8455063411559917 43 Smo128787 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component NYC1 0.8448966738626287 44 Smo430412 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8446132097083149 45 Smo228619 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase GPX7, ATGPX7 0.8433025015236617 46 Smo85224 0.8421493487486563 47 Smo67117 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.840365073934556 48 Smo77541 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana 0.8394402738859833 85 Smo104851 Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana 0.8389043956236258 51 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8381471923016169 95 Smo93274 0.8373521905068163 53 Smo93050 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana emb2004 0.836652391793297 92 Smo414905 0.8360407500888215 55 Smo141109 0.8351946702337018 66 Smo142036 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana 0.8343276153869468 60 Smo110984 AIG2-like protein D OS=Arabidopsis thaliana 0.8330605052092225 59 Smo230271 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.LMW PTP phosphatase 0.832323866256268 62 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase OVA6, PRORS1 0.8291669032780171 87 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component MAR1, TOC75-III 0.8255897492905956 76 Smo423213 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase scpl25 0.821140914739107 70 Smo447716 0.8208255683177552 88 Smo170457 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 134.6) 0.8189728601214327 98 Smo414783 0.8153203556637753 75 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8151557522636799 87 Smo164626 0.8149028736131495 77 Smo443642 Primary amine oxidase OS=Pisum sativum 0.8139169093763384 78 Smo425390 0.8115784503955542 94 Smo77583 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.MSH1 factor CHM, MSH1, ATMSH1, CHM1 0.811413180369417 82 Smo174928 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.pheophorbide a oxygenase (PAO) ACD1, PAO, LLS1 0.8110194305424622 85 Smo430123 0.8110119941876933 96 Smo109917 0.8107777545200956 87 Smo101516 0.8091630884634444 89 Smo110531 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana PDE247, CLB19 0.8084731466993311 91 Smo439129 Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor 0.8078741551327869 93 Smo410370 RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11 small nuclear ribonucleoprotein particle (snRNP).U11-59K snRNP component 0.8069088224578154 96