Sequence Description Alias PCC hrr Smo171199 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component RAPTOR1, ATRAPTOR1B, RAPTOR1B 0.9497886375129792 1 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9491295206144084 6 Smo413864 0.9488081614027842 3 Smo79650 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase HEN2 0.9391906443088623 4 Smo438861 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.9380556108049081 6 Smo118822 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein SCD1 0.9355120569106258 6 Smo419660 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.head module.MED17 component 0.9331442057037143 7 Smo97324 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana PI4KBETA1, PI-4KBETA1 0.9331434717167993 8 Smo411147 0.9306190573354168 9 Smo161477 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1 0.9293762020278339 10 Smo438209 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) PRT6 0.9273442534375187 13 Smo1983 Pumilio homolog 1 OS=Arabidopsis thaliana APUM4, PUM4 0.9267059543671512 12 Smo85837 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.1 protease ATSBT6.1, S1P, ATS1P 0.9265753173932154 13 Smo53092 Protein modification.phosphorylation.CMGC kinase superfamily.SRPK kinase 0.9264499231507152 14 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.9261260731494887 24 Smo406046 0.9247780077020173 23 Smo98098 Redox homeostasis.low-molecular-weight scavengers.glutathione metabolism.glutathione degradation.oxoprolinase OXP1 0.9247742575111512 17 Smo442417 0.9247360185492738 43 Smo156885 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG 0.9243582911244284 19 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.9235662769496477 20 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP 0.9217545186706413 50 Smo432361 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.9206983018249839 22 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone GTB1 0.9186075807050943 40 Smo413327 0.9177820696643767 24 Smo145521 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component DDB1A 0.9176131284592861 25 Smo182327 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component 0.917437935684646 51 Smo167789 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component ftsh9 0.9168273681358587 27 Smo144158 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507 0.9164808391411837 28 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL6 0.9164547487827849 49 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.9154160112192196 30 Smo10839 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.9150433523304468 31 Smo440052 0.9148379590216443 34 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.9143711076601557 33 Smo413471 0.9119545207109647 34 Smo79007 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9118590187373934 35 Smo428704 0.9114797175100314 36 Smo70578 0.9112108381940585 63 Smo440912 0.9108330270987501 38 Smo50132 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1 0.9108206856953455 39 Smo40493 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase 0.9106166611816501 40 Smo30444 0.9085763121683242 41 Smo269945 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana PI4KBETA1, PI-4KBETA1 0.9085427144294944 42 Smo235391 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.9084534378944724 43 Smo79402 0.9081902466660574 44 Smo441216 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component ATRPA70A, RPA1A, ATRPA1A, RPA70A 0.9076879921274398 45 Smo437976 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.9067386261893902 46 Smo168303 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica 0.9062215229296411 47 Smo441701 0.9060904843479719 48 Smo438348 Protein MEI2-like 5 OS=Arabidopsis thaliana AML5, ML5 0.9059238946012967 49 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9058054600668977 74 Smo441325 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component 0.9055361834682868 51 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) KEA1, ATKEA1 0.9052073178087532 52 Smo439144 0.9047268024571642 53 Smo441667 RNA biosynthesis.transcriptional activation.CAMTA transcription factor CAMTA3, SR1 0.9034254380473176 54 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976 0.9033812435947913 55 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.9033800317572649 56 Smo93800 Protein modification.peptide maturation.endomembrane system.gamma secretase complex.NCT component 0.9024522878499036 57 Smo410159 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein SMG7 0.9019401555668208 58 Smo410730 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.9001587021619938 69 Smo164122 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component ALA3 0.8993910343049811 60 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8988643187503684 61 Smo168576 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase LOX3 0.8985635837343382 62 Smo235886 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component ABO1, ELO2 0.8985389389431959 63 Smo172575 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component ftsh4 0.8983400176105926 64 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase BGAL8 0.8982659556277999 65 Smo424372 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.8981130764600186 66 Smo403203 ATDJC39, ARL2 0.8975510261205947 67 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.89701316200025 68 Smo420183 RNA biosynthesis.transcriptional activation.Trihelix transcription factor 0.8969105661589492 69 Smo169694 0.8966276883677933 70 Smo31929 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana 0.8965914658458706 71 Smo170207 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16 0.8965153371714791 72 Smo146605 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A1 component 0.8959351352766246 73 Smo73405 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.assembly phase.TAH18 component 0.8946885791866912 74 Smo437662 0.893424364732511 75 Smo61158 0.8932495776186323 76 Smo98006 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component ATCUL3A, ATCUL3, CUL3A, CUL3 0.892375828787285 77 Smo268911 Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana SAY1 0.891439511211626 78 Smo230720 Elongation factor 1-alpha OS=Oryza sativa subsp. japonica 0.8912807090583152 79 Smo88215 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR 0.8911080603831368 80 Smo99084 Phytohormones.ethylene.synthesis.ETO-type regulator protein 0.890500963186872 81 Smo438753 0.8885919453484608 83 Smo442780 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein 0.888306204648962 84 Smo75384 DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica 0.8882797329270316 85 Smo101367 0.8882724590745321 86 Smo441646 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO84 component EXO84B 0.8878599521208835 88 Smo267628 DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica 0.8870321932140847 89 Smo86180 Amino acid metabolism.degradation.branched-chain amino acid.enoyl-CoA hydratase CHY1 0.8868548350082842 90 Smo444049 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.8865325257142971 91 Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.8862062379808799 100 Smo110102 0.886115074785468 93 Smo447924 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT 0.8835197581369476 97 Smo439915 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor TPR1 0.8832901586534545 98 Smo431374 RNA biosynthesis.transcriptional activation.ARID transcription factor 0.8819032760942066 99