Sequence Description Alias PCC hrr Solyc09g011830.4.1 TAC13 cofactor of plastid-encoded RNA polymerase PTAC13, Solyc09g011830 0.8939232028208196 2 Solyc02g093460.4.1 tRNA pseudouridine synthase (TruB) Solyc02g093460 0.8884648967687286 2 Solyc03g078080.4.1 plastidial UMP kinase (PUMPKIN) Solyc03g078080 0.8872278574441332 3 Solyc01g097160.3.1 no hits & (original description: none) Solyc01g097160 0.8814149480213542 4 Solyc11g006680.3.1 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 1191.0) Solyc11g006680 0.8788750099358057 9 Solyc07g043600.4.1 plastidial RNA processing factor (PPR287) Solyc07g043600 0.8756778088561941 37 Solyc03g119450.3.1 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays (sp|a7xn92|cfm3_maize : 457.0) EMB1865, Solyc03g119450 0.874529475523742 25 Solyc07g039500.4.1 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica (sp|q2r1u8|cfm3_orysj : 549.0) Solyc07g039500 0.8724453240271534 21 Solyc03g007590.4.1 Uncharacterized protein At3g49140 OS=Arabidopsis thaliana (sp|q0wmn5|y3913_arath : 347.0) Solyc03g007590 0.8721037601084077 21 Solyc12g013870.3.1 no hits & (original description: none) Solyc12g013870 0.8667372271918692 10 Solyc02g081920.3.1 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase PTAC14, Solyc02g081920 0.8610785089681455 11 Solyc05g055350.3.1 endoribonuclease (RNase Z) CPZ, TRZ2, Solyc05g055350 0.8604321619050912 49 Solyc03g111260.3.1 exo-/endoribonuclease (RNase J) emb2746, Solyc03g111260 0.8586538686591341 15 Solyc03g111050.3.1 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase PTAC10, PDE312, Solyc03g111050 0.8576767124832291 14 Solyc08g065970.3.1 basal transcription factor (Sigma) SIGC, SIG3, Solyc08g065970 0.85653732832856 21 Solyc11g066870.3.1 component Tic100 of inner envelope TIC-20 complex emb1211, Solyc11g066870 0.8541448697028963 22 Solyc08g080550.1.1 DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana (sp|q8w4e1|rh47_arath : 617.0) ISE1, EMB1586, Solyc08g080550 0.8486920134376866 22 Solyc07g019650.4.1 protein-only ribonuclease (RNase P) PRORP1, Solyc07g019650 0.847264400009682 70 Solyc02g067540.3.1 no hits & (original description: none) Solyc02g067540 0.8457324491041921 32 Solyc11g065870.3.1 no hits & (original description: none) emb2738, Solyc11g065870 0.8437662688778895 31 Solyc11g068680.2.1 no hits & (original description: none) Solyc11g068680 0.8373284080727464 72 Solyc05g054600.3.1 methionine-tRNA ligase OVA1, Solyc05g054600 0.8362544606772857 66 Solyc10g039270.2.1 protein folding catalyst (FKBP) Solyc10g039270 0.8339666684034729 27 Solyc03g025310.3.1 HCF106 protein involved in PS-II assembly. component Hcf106 of thylakoid membrane Tat translocation system HCF106, Solyc03g025310 0.8322507530601803 59 Solyc11g007160.2.1 RNA editing factor (ORRM) Solyc11g007160 0.8319237091601814 28 Solyc09g083350.3.1 CFM3-type plastidial RNA splicing factor ATCFM3A, CFM3A, Solyc09g083350 0.8314754975418541 29 Solyc08g066140.3.1 no hits & (original description: none) Solyc08g066140 0.83139961480934 30 Solyc04g050540.4.1 PAP1/TAC3 cofactor of plastid-encoded RNA polymerase PTAC3, Solyc04g050540 0.8301780827639568 38 Solyc04g015330.3.1 Uncharacterized protein At3g52155, chloroplastic OS=Arabidopsis thaliana (sp|q94by1|y3515_arath : 268.0) Solyc04g015330 0.8295900470914467 32 Solyc08g048550.3.1 protease (Deg) HHOA, DEG5, DEGP5, Solyc08g048550 0.8288006874066867 33 Solyc02g061820.4.1 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana (sp|q05753|akrp_arath : 388.0) EMB16, EMB2036, AKRP, Solyc02g061820 0.8287173512285974 71 Solyc12g014220.3.1 no hits & (original description: none) Solyc12g014220 0.8279418651680928 35 Solyc05g009780.3.1 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, Solyc05g009780 0.8275476701892964 61 Solyc08g045780.4.1 Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana (sp|q9scp4|pp279_arath : 565.0) Solyc08g045780 0.8260407619533822 53 Solyc01g068290.4.1 no hits & (original description: none) Solyc01g068290 0.8257518200402454 49 Solyc01g089870.3.1 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana (sp|q8lps6|ppr3_arath : 622.0) Solyc01g089870 0.8222852975174999 82 Solyc01g057200.4.1 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana (sp|q9squ6|pp216_arath : 561.0) EMB2750, Solyc01g057200 0.8209029161579083 67 Solyc04g054270.4.1 Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica (sp|a3abe1|ppr5_orysj : 606.0) EMB2453, ATPPR5, Solyc04g054270 0.8209015957262911 75 Solyc02g079730.4.1 Thioredoxin-like fold domain-containing protein MRL7, chloroplastic OS=Arabidopsis thaliana (sp|f4jlc1|mrl7_arath : 327.0) Solyc02g079730 0.8198191922851469 48 Solyc12g015710.2.1 no hits & (original description: none) Solyc12g015710 0.8192505076901099 49 Solyc03g119960.3.1 Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica (sp|q5ks50|nph3_orysj : 240.0) Solyc03g119960 0.8190102719818245 50 Solyc01g010460.4.1 Protein PTST homolog 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lfy0|ptst2_arath : 105.0) Solyc01g010460 0.8158609741167427 81 Solyc12g007310.3.1 lactoyl-glutathione lyase (GLX1) Solyc12g007310 0.8155300613893296 85 Solyc12g098990.2.1 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana (sp|q9squ6|pp216_arath : 635.0) EMB2750, Solyc12g098990 0.8113940601135373 63 Solyc07g042800.2.1 no hits & (original description: none) Solyc07g042800 0.8108369036220937 64 Solyc10g047050.2.1 ARC5 plastid division dynamin-like protein DRP5B, ARC5, Solyc10g047050 0.8106688261225504 65 Solyc02g077280.4.1 GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana (sp|q8vz74|era_arath : 510.0) Solyc02g077280 0.8106264553662851 66 Solyc04g009020.4.1 plastidial RNA transcript stability factor HCF107, Solyc04g009020 0.8106116421793289 67 Solyc08g066120.4.1 polynucleotide phosphorylase (PNP) RIF10, PNP, Solyc08g066120 0.8103604685113663 69 Solyc05g017990.4.1 no hits & (original description: none) Solyc05g017990 0.8098239834347458 70 Solyc11g066300.3.1 component CAF of CRS2-CAF plastidial RNA splicing factor complexes CAF2, ATCAF2, Solyc11g066300 0.8091920496139696 72 Solyc09g015360.4.1 no hits & (original description: none) Solyc09g015360 0.8084900307464605 74 Solyc02g069570.3.1 Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana (sp|q9sa76|ppr64_arath : 691.0) EMB2279, EMB88, Solyc02g069570 0.8076406345463366 84 Solyc08g013850.1.1 RNA editing factor (CRR21) CRR21, Solyc08g013850 0.8070108668242336 99 Solyc03g005010.4.1 no hits & (original description: none) Solyc03g005010 0.8055322302044237 79 Solyc01g080780.2.1 component Toc90|Toc120|Toc132|Toc159 of outer envelope TOC translocation system PPI2, ATTOC159, TOC159, TOC160, TOC86, Solyc01g080780 0.8048248194616069 82 Solyc03g046340.3.1 component FtsHi of protein translocation ATPase motor complex Solyc03g046340 0.8038304061582503 83 Solyc05g006800.2.1 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q0wqw5|ppr85_arath : 567.0) CRR28, Solyc05g006800 0.8032001533377465 85 Solyc04g080830.4.1 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana (sp|q9fxh1|ppr52_arath : 966.0) Solyc04g080830 0.8029966967871968 86 Solyc04g081540.3.1 no hits & (original description: none) Solyc04g081540 0.8010344525867288 88 Solyc02g091280.3.1 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP3, NCLPP3, Solyc02g091280 0.8003200842144684 91 Solyc12g013890.2.1 no hits & (original description: none) emb2737, EMB64, Solyc12g013890 0.8002791347578541 92 Solyc12g055940.3.1 no hits & (original description: none) Solyc12g055940 0.7996110984760079 93 Solyc01g087290.3.1 tRNA dihydrouridine synthase Solyc01g087290 0.7975454567215489 99 Solyc04g009260.3.1 Disease resistance protein RPP13 OS=Arabidopsis thaliana (sp|q9m667|rpp13_arath : 434.0) Solyc04g009260 0.7970016160300109 100