Sequence Description Alias PCC hrr MA_124140g0010 no hits & (original description: none) 0.9695188088664377 3 MA_407396g0010 Stromal processing peptidase, chloroplastic OS=Arabidopsis thaliana (sp|q9fih8|spp_arath : 303.0) 0.9668403578754073 5 MA_298732g0010 Stromal processing peptidase, chloroplastic OS=Arabidopsis thaliana (sp|q9fih8|spp_arath : 322.0) 0.9612101653805507 6 MA_657535g0010 RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum (sp|p08926|ruba_pea : 314.0) CH-CPN60A, CPN60A, SLP 0.9600700638258045 5 MA_10436489g0010 ribonuclease (RNC1) 0.9573941529782147 10 MA_334187g0010 no hits & (original description: none) 0.9568929373119996 6 MA_542957g0010 no hits & (original description: none) 0.9567446335220845 7 MA_12327g0010 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica (sp|q5vry0|rh39_orysj : 324.0) RH39 0.9561946240078429 8 MA_952592g0010 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana (sp|q9sxj6|clpp3_arath : 100.0) CLPP3, NCLPP3 0.9557336673738979 30 MA_20787g0010 Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum (sp|p80461|gshrp_tobac : 103.0) GR, EMB2360, ATGR2 0.9553218228640006 35 MA_12095g0010 stromal processing peptidase (SPP) 0.9552142190509214 11 MA_10432388g0010 LTO1 protein involved in PS-II assembly. thiol-disulfide oxidoreductase (LTO1) 0.9551685426151121 12 MA_587689g0010 RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis (sp|p08824|ruba_ricco : 352.0) CH-CPN60A, CPN60A, SLP 0.9542899684686242 13 MA_10432072g0010 CFM2-type plastidial RNA splicing factor ATCFM3A, CFM3A 0.9532268762223159 14 MA_34924g0010 transcription factor (Trihelix). atypical dual-specificity phosphatase (PFA-DSP) 0.9525878246226483 15 MA_260111g0010 No annotation 0.9523824986480445 16 MA_17700g0010 no hits & (original description: none) 0.9517516624407423 17 MA_10431770g0010 chaperone (Hsp90) EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88 0.9516905050962642 18 MA_94165g0010 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 635.0) CRR22 0.9514777246889037 19 MA_385472g0010 transcription factor (mTERF) 0.951124555000478 20 MA_380074g0010 component Tic22 of inner envelope TIC translocation system 0.9510244904490337 21 MA_10436789g0010 no hits & (original description: none) 0.9499876094914292 22 MA_894439g0010 Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana (sp|q0wnn7|pp176_arath : 365.0) 0.9498777640503391 23 MA_10430415g0010 no hits & (original description: none) 0.9498295823886158 52 MA_97627g0010 Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lje4|cpnb2_arath : 593.0) 0.9497799546286455 25 MA_21385g0010 no hits & (original description: none) HCF173 0.9495080505406762 37 MA_89112g0010 no hits & (original description: none) 0.9489056699660827 27 MA_785852g0010 PAP2/TAC2 cofactor of plastid-encoded RNA polymerase 0.9488336030460868 28 MA_69152g0010 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 227.0) MEE40 0.9488329866261849 29 MA_159916g0010 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP3, NCLPP3 0.9484083309727438 30 MA_164820g0010 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP3, NCLPP3 0.9484083309727438 31 MA_9741773g0010 RuBisCO large subunit-binding protein subunit alpha (Fragment) OS=Ricinus communis (sp|p08824|ruba_ricco : 281.0) CH-CPN60A, CPN60A, SLP 0.9483926473998634 32 MA_10436816g0010 ATPase ARSA1 OS=Chlamydomonas reinhardtii (sp|a8jgb0|asna1_chlre : 154.0) 0.9483373354318402 33 MA_10181415g0010 no hits & (original description: none) 0.9483136662732351 48 MA_10427047g0010 DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica (sp|q5vry0|rh39_orysj : 261.0) RH39 0.9481455410917593 35 MA_8499291g0010 WAT1-related protein At3g02690, chloroplastic OS=Arabidopsis thaliana (sp|q93v85|wtr16_arath : 149.0) 0.9478013377567283 46 MA_10050138g0010 protein-only ribonuclease (RNase P) PRORP1 0.9476036232215965 37 MA_2041g0020 Stromal 70 kDa heat shock-related protein, chloroplastic OS=Pisum sativum (sp|q02028|hsp7s_pea : 192.0) CPHSC70-2EAT SHOCK PROTEIN 70-2, cpHsc70-2, HSC70-7 0.947554619999782 38 MA_96691g0010 plastidial mRNA processing factor (PPR10) 0.9462043419260342 39 MA_10427944g0010 no hits & (original description: none) SPD1 0.9460185214150063 40 MA_10436666g0010 Histidine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|o82413|syhm_arath : 221.0) 0.9460106002108124 41 MA_10435533g0010 no hits & (original description: none) 0.9456418884946439 56 MA_10433315g0010 no hits & (original description: none) 0.9453669215097815 43 MA_10437193g0010 Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana (sp|q949y5|egy1_arath : 352.0) EGY1 0.9451907079256002 93 MA_171750g0010 no hits & (original description: none) emb1703 0.9437972283855869 45 MA_7675554g0010 pyrimidine reductase PHS1 0.9436250983325265 71 MA_312116g0010 riboflavin synthase (RibC) 0.9435181756679794 47 MA_10432812g0010 no hits & (original description: none) 0.9430073514293577 48 MA_8889264g0010 no hits & (original description: none) 0.9426358211768553 50 MA_69306g0030 no hits & (original description: none) 0.942335881327632 72 MA_10366066g0010 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9ljl3|prep1_arath : 136.0) ATPREP1, PREP1, ATZNMP 0.9422686503083005 82 MA_10433293g0010 ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9fgm0|ftshb_arath : 367.0) FTSH11 0.9420533816313547 53 MA_679956g0010 component NQO3 of NADH dehydrogenase electron input (module N) CI76, EMB1467 0.9418881817831913 54 MA_31170g0010 RNA editing factor (MEF19) CRR22 0.9417988702512743 55 MA_502125g0010 targeting peptid degrading peptidase (PreP) ATPREP2, PREP2 0.9416764783381713 99 MA_10430943g0010 large subunit of isopropylmalate isomerase heterodimer. large subunit of methylthioalkylmalate isomerase ATLEUC1, IIL1 0.9413860961258331 57 MA_10428299g0010 no hits & (original description: none) PTAC10, PDE312 0.9403859165267211 58 MA_229920g0010 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica (sp|q75gt3|clpb2_orysj : 417.0) CLPB3, CLPB-P, APG6 0.9402186097207115 59 MA_10436405g0010 no hits & (original description: none) 0.9385982523022643 99 MA_10038446g0010 No annotation 0.9385879209125024 63 MA_14025g0020 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase PTAC10, PDE312 0.938579463169704 64 MA_116156g0010 no hits & (original description: none) 0.9384782889695084 71 MA_20503g0010 no hits & (original description: none) PTAC17 0.9383297984315012 66 MA_10435649g0010 Uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic OS=Arabidopsis thaliana (sp|q94bu1|y1181_arath : 110.0) 0.9380649459645567 79 MA_10430581g0010 Probable GTP diphosphokinase CRSH, chloroplastic OS=Arabidopsis thaliana (sp|q84r11|crsh_arath : 424.0) ATCRSH, CRSH 0.9379505600245998 68 MA_10427105g0010 Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic OS=Arabidopsis thaliana (sp|q9ma15|ab1k3_arath : 97.4) ATATH8 0.9377663020916928 70 MA_170161g0010 Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana (sp|o22714|ppr86_arath : 281.0) 0.9376432211995683 71 MA_9997953g0010 Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana (sp|o22714|ppr86_arath : 281.0) 0.9376432211995683 72 MA_6176566g0010 no hits & (original description: none) 0.9374744481230461 74 MA_9453036g0010 No annotation 0.9373646755729661 75 MA_10434095g0010 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica (sp|q851q6|obgc2_orysj : 145.0) 0.9371047750634489 76 MA_81888g0010 Probable glutamyl endopeptidase, chloroplastic OS=Arabidopsis thaliana (sp|q8vzf3|cgep_arath : 176.0) 0.9369729009846705 77 MA_8868156g0010 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana (sp|q8vze7|rap_arath : 254.0) ATRAP, RAP 0.9363486551187353 84 MA_710226g0010 no hits & (original description: none) 0.9355710085625059 88 MA_381817g0020 Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 555.0) 0.9350728032606759 83 MA_9216541g0010 aspartate-tRNA ligase 0.9348051405244329 85 MA_36585g0020 mRNA poly-A-tail binding factor (PABP) PAB7 0.934655388702255 86 MA_175060g0010 No annotation 0.9346116477681299 87 MA_453303g0010 no hits & (original description: none) 0.9342799221504402 89 MA_10428434g0010 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana (sp|a8mpr5|ftsi2_arath : 94.4) EMB2083 0.9339607660326515 92 MA_10426418g0010 no hits & (original description: none) 0.9336704245431081 93 MA_99207g0020 aspartate aminotransferase AAT3, ATAAT1, ASP5 0.9336612424570074 94 MA_10435664g0010 no description available(sp|q8ry11|ampp2_arath : 295.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 208.1) 0.9335437175073311 95 MA_10432881g0010 no hits & (original description: none) 0.9333100667146341 97 MA_122602g0010 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana (sp|q0wlc6|pp349_arath : 162.0) MRL1 0.9332009306643753 98 MA_10432295g0010 Fructose-1,6-bisphosphatase, chloroplastic OS=Brassica napus (sp|q07204|f16p1_brana : 134.0) & Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 131.5) 0.9331714947653605 99 MA_10433912g0010 no hits & (original description: none) ATKEA2, KEA2 0.9319311039164458 100