Sequence Description Alias PCC hrr LOC_Os11g13420.1 no hits & (original description: none) LOC_Os11g13420 0.9343558434721555 1 LOC_Os01g37820.1 no hits & (original description: none) LOC_Os01g37820 0.925150605590363 2 LOC_Os03g52640.2 no hits & (original description: none) LOC_Os03g52640 0.920292654415602 5 LOC_Os04g52520.4 APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 451.0) APO1, LOC_Os04g52520 0.916459900663058 4 LOC_Os06g11140.1 NAD(P)H dehydrogenase (NDC) NDC1, LOC_Os06g11140 0.9159849799109179 5 LOC_Os05g44330.5 Protein DJ-1 homolog C OS=Arabidopsis thaliana (sp|q8vy09|dj1c_arath : 425.0) LOC_Os05g44330 0.9128300317644354 6 LOC_Os03g45400.1 no hits & (original description: none) LOC_Os03g45400 0.9126667652786304 7 LOC_Os01g53150.2 GTP-binding protein At2g22870 OS=Arabidopsis thaliana (sp|o81004|y2287_arath : 299.0) LOC_Os01g53150 0.9113397992390362 8 LOC_Os07g30200.1 asparagine-tRNA ligase ATNS1, NS1, OVA8, LOC_Os07g30200 0.9083593170226487 9 LOC_Os02g22060.1 no hits & (original description: none) LOC_Os02g22060 0.9080830174882655 10 LOC_Os06g01460.1 no hits & (original description: none) LOC_Os06g01460 0.907248047535098 11 LOC_Os03g05806.1 rRNA pseudouridine synthase (RsuA) SVR1, LOC_Os03g05806 0.9053016551424986 12 LOC_Os01g43070.1 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana (sp|p82715|ppd5_arath : 277.0) LOC_Os01g43070 0.903468019779234 13 LOC_Os02g53770.1 isoleucine-tRNA ligase OVA2, LOC_Os02g53770 0.9008016704296512 14 LOC_Os02g07250.1 no hits & (original description: none) LOC_Os02g07250 0.9007710859620216 15 LOC_Os08g33900.1 no hits & (original description: none) LOC_Os08g33900 0.9003904871688516 16 LOC_Os05g50980.1 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase PTAC14, LOC_Os05g50980 0.9002471767134484 17 LOC_Os12g29990.1 mitochondrial tRNA threonylcarbamoyl transferase GCP1, LOC_Os12g29990 0.8997429925980706 18 LOC_Os04g51310.1 no hits & (original description: none) LOC_Os04g51310 0.8986886116440271 19 LOC_Os08g44290.1 RNA editing factor (CP31) ATRBP31, CP31, ATRBP33, RBP31, LOC_Os08g44290 0.8986484235749058 20 LOC_Os01g45370.1 no hits & (original description: none) LOC_Os01g45370 0.8984624730405547 21 LOC_Os11g34180.1 manganese/calcium cation transporter (BICAT) LOC_Os11g34180 0.8969586861124624 22 LOC_Os02g22070.1 HPE1 plastidial RNA splicing factor LOC_Os02g22070 0.8964842678070781 23 LOC_Os01g74190.1 no hits & (original description: none) LOC_Os01g74190 0.8962634991863593 24 LOC_Os03g04300.3 Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana (sp|q05753|akrp_arath : 282.0) EMB16, EMB2036, AKRP, LOC_Os03g04300 0.8953443866493351 25 LOC_Os02g05500.1 no hits & (original description: none) LOC_Os02g05500 0.894394196197982 26 LOC_Os01g47450.1 carboxy-terminal processing peptidase (CtpA) LOC_Os01g47450 0.8932598804708204 27 LOC_Os07g12640.1 dihydroxyacetone phosphate reductase (SFD1) GLY1, SFD1, LOC_Os07g12640 0.8928606132576664 28 LOC_Os04g58410.1 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana (sp|o65607|msh3_arath : 86.7) LOC_Os04g58410 0.8924522444511086 29 LOC_Os02g55200.1 Protein NCA1 OS=Arabidopsis thaliana (sp|q9m2v1|nca1_arath : 416.0) LOC_Os02g55200 0.8912536607610121 30 LOC_Os02g20490.1 no hits & (original description: none) LOC_Os02g20490 0.887984096093092 31 LOC_Os07g48810.1 peptidyl-prolyl isomerase LOC_Os07g48810 0.8870699381925101 32 LOC_Os04g02780.1 indole-3-acetamide hydrolase TOC64-I, ATTOC64-I, AMI1, ATAMI1, LOC_Os04g02780 0.8870624361617385 33 LOC_Os03g03949.2 LTO1 protein involved in PS-II assembly. thiol-disulfide oxidoreductase (LTO1) LOC_Os03g03949 0.8856837131245507 34 LOC_Os01g04860.1 Protein root UVB sensitive 5 OS=Arabidopsis thaliana (sp|b6idh3|rus5_arath : 364.0) RUS5, LOC_Os01g04860 0.8849884470490915 35 LOC_Os08g36140.1 PSA2 protein involved in PS-I assembly EDA3, LOC_Os08g36140 0.8838938430079415 36 LOC_Os02g02590.1 Pentatricopeptide repeat-containing protein At2g01860 OS=Arabidopsis thaliana (sp|q5xet4|pp142_arath : 320.0) EMB975, LOC_Os02g02590 0.8832213650462916 37 LOC_Os09g34000.1 no hits & (original description: none) LOC_Os09g34000 0.8831360125006457 38 LOC_Os05g12170.1 no hits & (original description: none) LOC_Os05g12170 0.8807030801508324 39 LOC_Os05g01750.1 tRNA pseudouridine synthase (TruB) LOC_Os05g01750 0.8803103848717994 40 LOC_Os04g39060.2 CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana (sp|q8l7c2|cfm2_arath : 511.0) ATCFM2, CFM2, LOC_Os04g39060 0.8792660197694349 41 LOC_Os09g02214.1 proton:sodium cation antiporter (NHD) NHD1, ATNHD1, LOC_Os09g02214 0.8781975119237698 42 LOC_Os01g61560.1 phytol kinase (VTE5) LOC_Os01g61560 0.8781228190385811 43 LOC_Os03g01830.1 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica (sp|q0dvx2|rh50_orysj : 1155.0) LOC_Os03g01830 0.8772785109131707 44 LOC_Os01g55290.2 Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana (sp|q8lg95|pp332_arath : 280.0) emb1417, LOC_Os01g55290 0.8769736420815369 45 LOC_Os09g07570.1 subunit beta of ferredoxin-dependent thioredoxin reductase (FTR) complex LOC_Os09g07570 0.8760072813179025 46 LOC_Os05g29760.1 ferrochelatase FC-II, FC2, ATFC-II, LOC_Os05g29760 0.8749933588230514 47 LOC_Os02g03540.1 Ribose-phosphate pyrophosphokinase 1, chloroplastic OS=Oryza sativa subsp. japonica (sp|q6z2l5|kprs1_orysj : 724.0) & Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 332.9) LOC_Os02g03540 0.8749430490139164 48 LOC_Os04g01780.2 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Zea mays (sp|a0a1d6hq92|yced1_maize : 244.0) LOC_Os04g01780 0.8746190712927686 49 LOC_Os01g03650.1 component SUF-D of plastidial SUF system assembly phase NAP6, ATNAP6, LOC_Os01g03650 0.8733360144810453 50 LOC_Os08g25700.1 no hits & (original description: none) LOC_Os08g25700 0.8719757317264538 51 LOC_Os03g14280.1 plant-specific stabilizing component ClpT of chloroplast Clp-type protease complex LOC_Os03g14280 0.8715720163399467 52 LOC_Os05g03000.2 TerC protein involved in PS-II assembly ATTERC, PDE149, LOC_Os05g03000 0.8698796265541119 53 LOC_Os03g21630.1 no hits & (original description: none) LOC_Os03g21630 0.8692127697037191 54 LOC_Os02g53330.1 Putative D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica (sp|q6zhe5|dcyd1_orysj : 783.0) ACD1, D-CDES, ATACD1, LOC_Os02g53330 0.8680227929861689 55 LOC_Os11g04500.1 assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) CcdA, LOC_Os11g04500 0.8676473473502522 56 LOC_Os12g18900.1 cysteine desulfurase component NFS2 of plastidial SUF system assembly phase ATSUFS, CPNIFS, ATNFS2, SUFS, ATCPNIFS, LOC_Os12g18900 0.8657306301293398 57 LOC_Os07g40700.2 no hits & (original description: none) LOC_Os07g40700 0.8634533574379822 58 LOC_Os08g21700.1 Protein DCL, chloroplastic OS=Solanum lycopersicum (sp|q42463|dcl_sollc : 122.0) LOC_Os08g21700 0.8634381856035277 59 LOC_Os08g06230.1 Nucleolar GTP-binding protein 1 OS=Arabidopsis thaliana (sp|q9c6i8|nog1_arath : 113.0) PDE318, LOC_Os08g06230 0.8633799132404698 60 LOC_Os01g28540.1 no hits & (original description: none) LOC_Os01g28540 0.8614747577850932 61 LOC_Os04g25400.2 7-hydroxymethyl chlorophyll(ide) a reductase LOC_Os04g25400 0.8612656410136742 62 LOC_Os02g58340.1 M3-class metalloprotease LOC_Os02g58340 0.8612482956582002 63 LOC_Os12g13460.1 [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana (sp|q9xi84|rbcmt_arath : 83.6) LOC_Os12g13460 0.8605573229812824 64 LOC_Os05g14194.1 lactoyl-glutathione lyase (GLX1) LOC_Os05g14194 0.8605341108144681 65 LOC_Os02g49326.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 159.4) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 94.0) LOC_Os02g49326 0.8595242674914633 66 LOC_Os07g04230.1 transcription factor (mTERF) EMB2219, LOC_Os07g04230 0.8592942018285827 67 LOC_Os03g08570.1 phytoene desaturase (PDS) PDS3, PDS, PDE226, LOC_Os03g08570 0.8591355976295948 68 LOC_Os06g30910.1 no hits & (original description: none) LOC_Os06g30910 0.8589724303003848 69 LOC_Os03g64400.1 no hits & (original description: none) LOC_Os03g64400 0.858411940627963 70 LOC_Os06g30380.1 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 538.0) LOC_Os06g30380 0.8581990643369743 71 LOC_Os12g39370.1 no hits & (original description: none) LOC_Os12g39370 0.8579891700706834 72 LOC_Os07g04910.1 ER-associated protein (Reticulon) LOC_Os07g04910 0.8573634138383514 73 LOC_Os03g31170.1 component NSH2 of NSH1-NSH2 nucleoside hydrolase heterodimer URH2, LOC_Os03g31170 0.8571673759367314 74 LOC_Os09g26190.1 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana (sp|q8vyd6|pp374_arath : 496.0) LOC_Os09g26190 0.8561646237049806 75 LOC_Os12g04270.1 assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) CcdA, LOC_Os12g04270 0.8558192277405249 76 LOC_Os02g03090.1 no hits & (original description: none) LOC_Os02g03090 0.8547539309303865 77 LOC_Os09g21520.2 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica (sp|q6h601|rh22_orysj : 869.0) LOC_Os09g21520 0.8547045862972338 78 LOC_Os12g37530.1 iron-regulated metal cation transporter (FPN) MAR1, IREG3, ATIREG3, RTS3, LOC_Os12g37530 0.8545256308842848 79 LOC_Os01g73680.1 M18-class aspartyl aminopeptidase (DAP) LOC_Os01g73680 0.8542291167517949 80 LOC_Os04g55050.1 component GatA of glutamyl-tRNA-dependent amidotransferase complex LOC_Os04g55050 0.8538045802331521 81 LOC_Os02g07350.1 Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana (sp|q94f00|impl1_arath : 474.0) & Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 176.4) IMPL1, LOC_Os02g07350 0.8526206491664491 82 LOC_Os01g69120.1 no hits & (original description: none) LOC_Os01g69120 0.8516590349049534 83 LOC_Os12g06740.1 Putative F-box protein At3g52320 OS=Arabidopsis thaliana (sp|q9ft50|fb202_arath : 84.0) LOC_Os12g06740 0.8511177130127142 84 LOC_Os03g22670.1 no hits & (original description: none) LOC_Os03g22670 0.8507027431494083 85 LOC_Os07g07060.1 proline-tRNA ligase OVA6, PRORS1, LOC_Os07g07060 0.8506881925945838 86 LOC_Os05g05480.1 protease (Deg) DEGP2, LOC_Os05g05480 0.849550412623112 87 LOC_Os02g24354.1 diaminopimelate decarboxylase LOC_Os02g24354 0.8488626727924883 88 LOC_Os01g04900.1 plastidial protease (EGY) ATEGY2, EGY2, LOC_Os01g04900 0.84868130547768 89 LOC_Os01g31680.1 component cpTatC of thylakoid membrane Tat translocation system PGA2, APG2, TATC, UNE3, LOC_Os01g31680 0.8476960536659266 90 LOC_Os03g19510.1 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex NCLPP1, CLPP5, NCLPP5, LOC_Os03g19510 0.8473108500855372 91 LOC_Os02g13170.1 solute transporter (MTCC) LOC_Os02g13170 0.8472521952253486 92 LOC_Os02g32930.1 small solute transporter (BASS) LOC_Os02g32930 0.8469373899571836 93 LOC_Os05g33500.1 transcription factor (mTERF). mTERF4 plastidial RNA splicing factor LOC_Os05g33500 0.8468846086752201 94 LOC_Os04g37920.1 cryptochrome photoreceptor (CRY) HY4, ATCRY1, BLU1, OOP2, CRY1, LOC_Os04g37920 0.8457794963971715 95 LOC_Os07g25410.1 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, LOC_Os07g25410 0.8451614459987797 96 LOC_Os03g48050.1 no hits & (original description: none) LOC_Os03g48050 0.8451479713827951 97 LOC_Os03g01750.1 phosphoglucan phosphatase (SEX4) ATSEX4, ATPTPKIS1, DSP4, SEX4, LOC_Os03g01750 0.8424579213887692 98 LOC_Os07g38150.1 no hits & (original description: none) LOC_Os07g38150 0.8421508485111164 99 LOC_Os01g65400.2 plastidial exonuclease LOC_Os01g65400 0.8420936217588637 100