Sequence Description Alias PCC hrr LOC_Os04g16740.1 subunit alpha of peripheral CF1 subcomplex of ATP synthase complex ATPA, LOC_Os04g16740 0.971650787221615 2 LOC_Os02g24598.1 Chloroplast envelope membrane protein OS=Oryza sativa subsp. indica (sp|p0c303|cema_orysi : 429.0) YCF10, LOC_Os02g24598 0.9596987111675579 2 LOC_Os08g15248.1 component NdhB of NDH membrane subcomplex M NDHB.1, LOC_Os08g15248 0.9595678519013856 3 LOC_Os07g25004.1 component NdhB of NDH membrane subcomplex M NDHB.1, LOC_Os07g25004 0.9595678519013856 4 LOC_Os02g24604.1 YCF4 protein involved in PS-I assembly YCF4, LOC_Os02g24604 0.9568658158184182 5 LOC_Os10g21266.1 subunit beta of peripheral CF1 subcomplex of ATP synthase complex ATPB, PB, LOC_Os10g21266 0.9466998778088404 7 LOC_Os10g21324.1 apocytochrome b component PetB of cytochrome b6/f complex PETB, LOC_Os10g21324 0.9358217875119272 10 LOC_Os04g16846.1 apocytochrome b component PetB of cytochrome b6/f complex PETB, LOC_Os04g16846 0.9358217875119272 10 LOC_Os01g57942.1 apocytochrome b component PetB of cytochrome b6/f complex PETB, LOC_Os01g57942 0.9358217875119272 10 LOC_Os01g58000.1 subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex ATPE, LOC_Os01g58000 0.9336988165653958 12 LOC_Os10g21342.1 component psRPL14 of large ribosomal subunit proteome RPL14, LOC_Os10g21342 0.9324820482388713 11 LOC_Os08g15276.1 component psRPL14 of large ribosomal subunit proteome RPL14, LOC_Os08g15276 0.9324820482388713 12 LOC_Os04g16828.1 component psRPL14 of large ribosomal subunit proteome RPL14, LOC_Os04g16828 0.9324820482388713 13 LOC_Os05g22722.1 component psRPL14 of large ribosomal subunit proteome RPL14, LOC_Os05g22722 0.9324820482388713 14 LOC_Os10g38206.1 component NdhC of NDH membrane subcomplex M NDHC, LOC_Os10g38206 0.9304467023830586 15 LOC_Os10g21312.1 component psRPS18 of small ribosomal subunit proteome RPS18, LOC_Os10g21312 0.9283481513360697 16 LOC_Os10g38278.1 component psRPS2 of small ribosomal subunit proteome RPS2, LOC_Os10g38278 0.9250835580233692 17 LOC_Os02g24612.1 component psRPS2 of small ribosomal subunit proteome RPS2, LOC_Os02g24612 0.9250835580233692 18 LOC_Os06g39708.1 component PsbB/CP47 of PS-II reaction center complex PSBB, LOC_Os06g39708 0.9245767470982752 19 LOC_Os10g38214.1 component psRPS4 of small ribosomal subunit proteome RPS4, LOC_Os10g38214 0.9233983618461934 20 LOC_Os04g16738.1 component psRPS4 of small ribosomal subunit proteome RPS4, LOC_Os04g16738 0.9233983618461934 21 LOC_Os04g16764.1 component psRPS4 of small ribosomal subunit proteome RPS4, LOC_Os04g16764 0.9233983618461934 22 LOC_Os06g46435.1 component NdhD of NDH membrane subcomplex M NAD4, LOC_Os06g46435 0.9225827897263095 23 LOC_Os04g16760.1 apoprotein PsaA of PS-I complex PSAA, LOC_Os04g16760 0.9192582135574351 24 LOC_Os05g01675.1 apoprotein PsaA of PS-I complex PSAA, LOC_Os05g01675 0.9192582135574351 25 LOC_Os12g10570.1 ATP synthase subunit beta, chloroplastic OS=Oryza sativa subsp. japonica (sp|p12085|atpb_orysj : 747.0) ATPB, PB, LOC_Os12g10570 0.9170079685269451 26 LOC_Os10g21310.1 component PsbB/CP47 of PS-II reaction center complex PSBB, LOC_Os10g21310 0.9118515101309607 27 LOC_Os10g21238.1 subunit b of membrane CF0 subcomplex of ATP synthase complex ATPF, LOC_Os10g21238 0.9109800289342358 28 LOC_Os10g38272.1 subunit b of membrane CF0 subcomplex of ATP synthase complex ATPF, LOC_Os10g38272 0.9109800289342358 29 LOC_Os04g16748.1 subunit b of membrane CF0 subcomplex of ATP synthase complex ATPF, LOC_Os04g16748 0.9109800289342358 30 LOC_Os10g38216.1 YCF3 protein involved in PS-I assembly YCF3, LOC_Os10g38216 0.9099922407044754 31 LOC_Os10g21254.1 YCF3 protein involved in PS-I assembly YCF3, LOC_Os10g21254 0.9099922407044754 32 LOC_Os04g16736.1 YCF3 protein involved in PS-I assembly YCF3, LOC_Os04g16736 0.9099922407044754 33 LOC_Os01g57966.1 YCF3 protein involved in PS-I assembly YCF3, LOC_Os01g57966 0.9099922407044754 34 LOC_Os04g16732.1 component NdhH of NDH subcomplex A NDHH, LOC_Os04g16732 0.9083974133351591 35 LOC_Os10g41696.1 component PsbK of PS-II complex LOC_Os10g41696 0.9082348979788706 36 LOC_Os10g21236.1 subunit a of membrane CF0 subcomplex of ATP synthase complex ATPI, LOC_Os10g21236 0.9041732462882112 37 LOC_Os04g16874.1 component PsbC/CP43 of PS-II reaction center complex PSBC, LOC_Os04g16874 0.9033444250855751 38 LOC_Os04g16872.1 component PsbD/D2 of PS-II reaction center complex PSBD, LOC_Os04g16872 0.9000483017501248 39 LOC_Os02g24574.1 component NdhG of NDH membrane subcomplex M NDHG, LOC_Os02g24574 0.8982966219874329 40 LOC_Os10g38274.1 subunit c of membrane CF0 subcomplex of ATP synthase complex LOC_Os10g38274 0.8971606019532161 41 LOC_Os10g21230.2 subunit c of membrane CF0 subcomplex of ATP synthase complex LOC_Os10g21230 0.8971606019532161 42 LOC_Os08g15312.1 component psRPL33 of large ribosomal subunit proteome LOC_Os08g15312 0.8967315426612731 43 LOC_Os06g39700.1 RpoA core component plastid-encoded RNA polymerase RPOA, LOC_Os06g39700 0.8958515865926197 44 LOC_Os02g24632.1 component PsbC/CP43 of PS-II reaction center complex PSBC, LOC_Os02g24632 0.894525829301524 45 LOC_Os06g39744.1 YCF4 protein involved in PS-I assembly YCF4, LOC_Os06g39744 0.8933732696461927 46 LOC_Os08g15270.1 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP1, PCLPP, LOC_Os08g15270 0.8929216472210794 47 LOC_Os10g38238.1 component psRPS14 of small ribosomal subunit proteome LOC_Os10g38238 0.8909953054227651 48 LOC_Os10g21244.1 component psRPS14 of small ribosomal subunit proteome LOC_Os10g21244 0.8909953054227651 49 LOC_Os04g16745.1 component psRPS14 of small ribosomal subunit proteome LOC_Os04g16745 0.8909953054227651 50 LOC_Os10g38276.1 subunit a of membrane CF0 subcomplex of ATP synthase complex ATPI, LOC_Os10g38276 0.8906567254182726 51 LOC_Os10g21308.1 component psRPL33 of large ribosomal subunit proteome LOC_Os10g21308 0.8862998836525028 52 LOC_Os06g39718.1 component psRPL33 of large ribosomal subunit proteome LOC_Os06g39718 0.8862998836525028 53 LOC_Os06g46434.1 assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II) YCF5, LOC_Os06g46434 0.8830870138037168 54 LOC_Os04g16866.1 component PsbK of PS-II complex LOC_Os04g16866 0.8818339613147629 55 LOC_Os04g16842.1 RpoA core component plastid-encoded RNA polymerase RPOA, LOC_Os04g16842 0.8804961609614261 56 LOC_Os04g16734.1 maturase (MatK) MATK, LOC_Os04g16734 0.8795826166759826 57 LOC_Os10g21268.1 large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer RBCL, LOC_Os10g21268 0.8795739551298725 58 LOC_Os10g21240.1 subunit alpha of peripheral CF1 subcomplex of ATP synthase complex ATPA, LOC_Os10g21240 0.876854184918157 59 LOC_Os10g21372.1 component psRPS7 of small ribosomal subunit proteome RPS7.1, RPS7, LOC_Os10g21372 0.8758431711526251 60 LOC_Os08g15246.1 component psRPS7 of small ribosomal subunit proteome RPS7.1, RPS7, LOC_Os08g15246 0.8758431711526251 61 LOC_Os04g16886.1 component psRPS7 of small ribosomal subunit proteome RPS7.1, RPS7, LOC_Os04g16886 0.8758431711526251 62 LOC_Os04g16856.1 component psRPS7 of small ribosomal subunit proteome RPS7.1, RPS7, LOC_Os04g16856 0.8758431711526251 63 LOC_Os07g25002.1 component psRPS7 of small ribosomal subunit proteome RPS7.1, RPS7, LOC_Os07g25002 0.8758431711526251 64 LOC_Os10g38212.1 component NdhJ of NDH subcomplex A NDHJ, LOC_Os10g38212 0.8752246663394926 65 LOC_Os01g58024.1 component NdhJ of NDH subcomplex A NDHJ, LOC_Os01g58024 0.8752246663394926 66 LOC_Os03g55874.1 subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex ATPB, PB, LOC_Os03g55874 0.874940154265442 67 LOC_Os12g10580.1 component psRPS15 of small ribosomal subunit proteome RBCL, LOC_Os12g10580 0.8711423819408325 68 LOC_Os10g21418.1 component NdhF of NDH membrane subcomplex M NDHF, LOC_Os10g21418 0.8686113449321569 69 LOC_Os07g41300.1 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Oryza sativa subsp. japonica (sp|p0c337|ndhh_orysj : 184.0) NDHH, LOC_Os07g41300 0.8677691066697478 70 LOC_Os01g25065.1 ATP synthase subunit beta, chloroplastic OS=Oryza sativa subsp. japonica (sp|p12085|atpb_orysj : 556.0) ATPB, PB, LOC_Os01g25065 0.8676225556471335 71 LOC_Os10g21326.1 component PetD/IV of cytochrome b6/f complex PETD, LOC_Os10g21326 0.8643602341520897 72 LOC_Os04g16844.1 component PetD/IV of cytochrome b6/f complex PETD, LOC_Os04g16844 0.8643602341520897 73 LOC_Os01g57945.1 component PetD/IV of cytochrome b6/f complex PETD, LOC_Os01g57945 0.8643602341520897 74 LOC_Os12g19580.1 Photosystem II protein D1 OS=Oryza sativa subsp. indica (sp|p0c433|psba_orysi : 363.0) PSBA, LOC_Os12g19580 0.8643454027964484 75 LOC_Os10g38234.1 apoprotein PsaB of PS-I complex PSAB, LOC_Os10g38234 0.8622237310190614 76 LOC_Os08g15308.1 component psRPS18 of small ribosomal subunit proteome RPS18, LOC_Os08g15308 0.8615704390515513 77 LOC_Os10g21212.1 component PsbC/CP43 of PS-II reaction center complex PSBC, LOC_Os10g21212 0.8572149378838447 78 LOC_Os04g16816.1 Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica (sp|q36996|ycf72_orysj : 203.0) RPL2.1, LOC_Os04g16816 0.8505108767201927 79 LOC_Os07g25018.1 Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica (sp|q36996|ycf72_orysj : 203.0) RPL2.1, LOC_Os07g25018 0.8505108767201927 80 LOC_Os09g24406.1 Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica (sp|q36996|ycf72_orysj : 203.0) RPL2.1, LOC_Os09g24406 0.8505108767201927 81 LOC_Os10g21214.1 component PsbZ of PS-II complex LOC_Os10g21214 0.8500796545233328 82 LOC_Os10g21298.1 component alpha/PsbE of PS-II cytochrome b559 heterodimer LOC_Os10g21298 0.8483204178559877 83 LOC_Os08g15322.1 component alpha/PsbE of PS-II cytochrome b559 heterodimer LOC_Os08g15322 0.8483204178559877 84 LOC_Os06g39728.1 component alpha/PsbE of PS-II cytochrome b559 heterodimer LOC_Os06g39728 0.8483204178559877 85 LOC_Os04g16830.1 DNA-directed RNA polymerase subunit beta OS=Oryza sativa (sp|p0c507|rpoc2_orysa : 534.0) RPOC2, LOC_Os04g16830 0.8474480568963342 86 LOC_Os09g04680.1 Photosystem II CP47 reaction center protein OS=Oryza nivara (sp|q6ene8|psbb_oryni : 694.0) PSBB, LOC_Os09g04680 0.8457590285036763 87 LOC_Os09g04690.1 no hits & (original description: none) LOC_Os09g04690 0.845717712933313 88 LOC_Os10g21398.1 component NdhI of NDH subcomplex A NDHI, LOC_Os10g21398 0.8416248801803052 89 LOC_Os10g21366.1 Uncharacterized protein ycf73 OS=Oryza sativa subsp. indica (sp|p0c311|ycf73_orysi : 415.0) LOC_Os10g21366 0.8360675570355945 90 LOC_Os08g15252.1 Uncharacterized protein ycf73 OS=Oryza sativa subsp. indica (sp|p0c311|ycf73_orysi : 415.0) LOC_Os08g15252 0.8360675570355945 91 LOC_Os04g16804.1 Uncharacterized protein ycf73 OS=Oryza sativa subsp. indica (sp|p0c311|ycf73_orysi : 415.0) LOC_Os04g16804 0.8360675570355945 92 LOC_Os07g25006.1 Uncharacterized protein ycf73 OS=Oryza sativa subsp. indica (sp|p0c311|ycf73_orysi : 415.0) LOC_Os07g25006 0.8360675570355945 93 LOC_Os10g21406.1 component PsaC of PS-I complex LOC_Os10g21406 0.833519257899198 94 LOC_Os07g22498.1 component PsaC of PS-I complex LOC_Os07g22498 0.833519257899198 95 LOC_Os06g46436.1 component PsaC of PS-I complex LOC_Os06g46436 0.833519257899198 96 LOC_Os10g21192.1 component PsbA/D1 of PS-II reaction center complex PSBA, LOC_Os10g21192 0.8329987296425647 97 LOC_Os07g46310.1 component CHL-H of magnesium-chelatase complex. ABAR chloroplast envelope-localized abscisic acid receptor CCH1, GUN5, CHLH, CCH, ABAR, LOC_Os07g46310 0.830063866208181 98 LOC_Os06g39738.1 apocytochrome f component PetA of cytochrome b6/f complex PETA, LOC_Os06g39738 0.8294897170909907 99 LOC_Os01g58020.1 Ribulose bisphosphate carboxylase large chain OS=Oryza sativa subsp. indica (sp|p0c511|rbl_orysi : 371.0) RBCL, LOC_Os01g58020 0.8279021961864298 100