Sequence Description Alias PCC hrr LOC_Os06g05390.1 no hits & (original description: none) LOC_Os06g05390 0.930419304801147 1 LOC_Os09g39390.1 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii (sp|q27yu7|rsp5_chlre : 95.1) LOC_Os09g39390 0.9255583241412111 3 LOC_Os06g01460.1 no hits & (original description: none) LOC_Os06g01460 0.9155895969718428 3 LOC_Os01g39960.1 lycopene epsilon cyclase (LCY-e) LUT2, LOC_Os01g39960 0.9132769661392894 4 LOC_Os02g07350.1 Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana (sp|q94f00|impl1_arath : 474.0) & Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 176.4) IMPL1, LOC_Os02g07350 0.9023905725219288 5 LOC_Os08g33900.1 no hits & (original description: none) LOC_Os08g33900 0.9020545764877329 6 LOC_Os03g03949.2 LTO1 protein involved in PS-II assembly. thiol-disulfide oxidoreductase (LTO1) LOC_Os03g03949 0.9017912519643795 7 LOC_Os01g31680.1 component cpTatC of thylakoid membrane Tat translocation system PGA2, APG2, TATC, UNE3, LOC_Os01g31680 0.8949835228669428 13 LOC_Os03g50270.1 no hits & (original description: none) LOC_Os03g50270 0.8948344338747329 19 LOC_Os05g33290.1 no hits & (original description: none) LOC_Os05g33290 0.8937628890214807 11 LOC_Os01g01302.1 shikimate kinase ATSKL1, SKL1, LOC_Os01g01302 0.8902784500746765 11 LOC_Os09g24670.1 no hits & (original description: none) LOC_Os09g24670 0.8894097018205303 12 LOC_Os05g34630.1 chlorophyll dephytylase (CLD) LOC_Os05g34630 0.8865760679351484 28 LOC_Os01g67000.1 VIPP protein involved in plastid membrane fusion PTAC4, VIPP1, LOC_Os01g67000 0.884375916003897 14 LOC_Os05g33520.1 no description available(sp|m1c5m7|rph1_soltu : 245.0) RPH1, LOC_Os05g33520 0.8837475030703751 15 LOC_Os04g51792.1 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana (sp|q941d3|pap8_arath : 239.0) LOC_Os04g51792 0.8834464463649948 23 LOC_Os11g05260.1 carboxy-D-arabinitol-1-phosphatase (CA1PP) LOC_Os11g05260 0.8828641789085901 17 LOC_Os09g33470.1 solute transporter (MTCC) LOC_Os09g33470 0.8824546746025621 18 LOC_Os11g11210.1 protease (LON) LOC_Os11g11210 0.882265567988988 19 LOC_Os08g41040.1 no hits & (original description: none) LOC_Os08g41040 0.882173055717274 20 LOC_Os08g07060.1 assembly factor CRR6 involved in NDH complex assembly CRR6, LOC_Os08g07060 0.880955988901454 21 LOC_Os08g32630.1 no hits & (original description: none) LOC_Os08g32630 0.8806570416741987 22 LOC_Os01g72205.1 no hits & (original description: none) LOC_Os01g72205 0.8805813855502616 23 LOC_Os04g44340.1 Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c5m1|yced2_arath : 112.0) LOC_Os04g44340 0.8789618536799102 24 LOC_Os12g08730.1 M-type thioredoxin ATHM2, LOC_Os12g08730 0.8783085728430298 34 LOC_Os08g16570.1 no hits & (original description: none) LOC_Os08g16570 0.8782235048239142 26 LOC_Os11g34180.1 manganese/calcium cation transporter (BICAT) LOC_Os11g34180 0.876502205193175 27 LOC_Os06g50130.1 no hits & (original description: none) LOC_Os06g50130 0.876152852014282 28 LOC_Os08g07540.1 adaptor component ClpF of chloroplast Clp-type protease complex LOC_Os08g07540 0.8754598736499334 29 LOC_Os12g29990.1 mitochondrial tRNA threonylcarbamoyl transferase GCP1, LOC_Os12g29990 0.8749713505081266 30 LOC_Os01g04860.1 Protein root UVB sensitive 5 OS=Arabidopsis thaliana (sp|b6idh3|rus5_arath : 364.0) RUS5, LOC_Os01g04860 0.874184524159516 31 LOC_Os08g44290.1 RNA editing factor (CP31) ATRBP31, CP31, ATRBP33, RBP31, LOC_Os08g44290 0.8733505882252033 33 LOC_Os12g13460.1 [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana (sp|q9xi84|rbcmt_arath : 83.6) LOC_Os12g13460 0.8730106605349648 33 LOC_Os05g44020.4 no hits & (original description: none) LOC_Os05g44020 0.8726663934877491 34 LOC_Os05g04070.1 Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 110.0) LOC_Os05g04070 0.8713825202454698 35 LOC_Os10g37330.1 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana (sp|q56y42|plr1_arath : 548.0) LOC_Os10g37330 0.8713728669309627 36 LOC_Os08g25900.1 PPL1 protein involved in PS-II assembly PPL1, LOC_Os08g25900 0.8709082972058005 37 LOC_Os07g04230.1 transcription factor (mTERF) EMB2219, LOC_Os07g04230 0.8706134691905638 38 LOC_Os01g28540.1 no hits & (original description: none) LOC_Os01g28540 0.8699979101786522 39 LOC_Os01g72800.1 component cpFtsY of thylakoid membrane SRP insertion system FRD4, CPFTSY, LOC_Os01g72800 0.8683903708415199 40 LOC_Os02g49326.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 159.4) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 94.0) LOC_Os02g49326 0.867432023591846 41 LOC_Os07g36180.2 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana (sp|q2v3h0|pp322_arath : 275.0) LOC_Os07g36180 0.8664704276769242 42 LOC_Os03g11230.1 no hits & (original description: none) LOC_Os03g11230 0.8652018024711665 43 LOC_Os05g32220.1 component psRPL1 of large ribosomal subunit proteome LOC_Os05g32220 0.8647308405379478 44 LOC_Os02g07360.1 ndhA-specific mRNA splicing factor. plastidial RNA processing factor (PPR287) LOC_Os02g07360 0.8632590775038979 45 LOC_Os09g10750.1 Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana (sp|o48529|str9_arath : 281.0) LOC_Os09g10750 0.8626402069004646 46 LOC_Os06g06190.1 no hits & (original description: none) LOC_Os06g06190 0.8624532597376721 47 LOC_Os03g20640.1 no hits & (original description: none) LOC_Os03g20640 0.8615316291760144 48 LOC_Os03g63360.1 no hits & (original description: none) LOC_Os03g63360 0.8609705389661371 49 LOC_Os03g48040.1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana (sp|q9c7y4|fdc2_arath : 216.0) FdC1, LOC_Os03g48040 0.8608488379281679 50 LOC_Os08g14440.1 ACT domain-containing protein DS12, chloroplastic OS=Oryza sativa subsp. japonica (sp|q0j709|up12_orysj : 426.0) LOC_Os08g14440 0.8603074336708786 51 LOC_Os05g50980.1 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase PTAC14, LOC_Os05g50980 0.859822432168563 52 LOC_Os02g43500.1 Protein ORANGE, chloroplastic OS=Arabidopsis thaliana (sp|q9fkf4|orang_arath : 391.0) LOC_Os02g43500 0.858731728430323 53 LOC_Os03g08570.1 phytoene desaturase (PDS) PDS3, PDS, PDE226, LOC_Os03g08570 0.8581073508162862 54 LOC_Os05g35540.1 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1f6|dgp3_arath : 458.0) LOC_Os05g35540 0.8579071249257556 55 LOC_Os08g44320.1 PTP phosphatase (LMW) LOC_Os08g44320 0.8556619261590108 56 LOC_Os11g24050.1 no hits & (original description: none) LOC_Os11g24050 0.8545806680253459 57 LOC_Os02g13170.1 solute transporter (MTCC) LOC_Os02g13170 0.8543926197332912 58 LOC_Os03g60639.1 no hits & (original description: none) LOC_Os03g60639 0.8538962043751631 59 LOC_Os01g59080.1 DAC protein involved in cytochrome b6/f complex assembly LOC_Os01g59080 0.8538828435014897 60 LOC_Os06g05950.1 no hits & (original description: none) LOC_Os06g05950 0.85304816575238 61 LOC_Os02g42570.1 subunit alpha of ferredoxin-dependent thioredoxin reductase (FTR) complex FTRA1, LOC_Os02g42570 0.8528093899145133 62 LOC_Os09g26190.1 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana (sp|q8vyd6|pp374_arath : 496.0) LOC_Os09g26190 0.8514379069977897 63 LOC_Os12g01580.1 metal-citrate complex transporter (FRD) LOC_Os12g01580 0.849969365145376 64 LOC_Os02g39740.1 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica (sp|q6k9c1|atab2_orysj : 602.0) ATAB2, LOC_Os02g39740 0.8491712064227966 65 LOC_Os05g49650.1 no hits & (original description: none) LOC_Os05g49650 0.8491013629015048 66 LOC_Os01g17240.1 phosphate transporter (PHT4) ANTR1, PHT4;1, LOC_Os01g17240 0.8488628719791553 67 LOC_Os03g22430.1 non-proteolytic core component ClpR of chloroplast Clp-type protease complex LOC_Os03g22430 0.84868130547768 89 LOC_Os01g64270.1 no hits & (original description: none) LOC_Os01g64270 0.8476762604115086 69 LOC_Os02g02390.1 no hits & (original description: none) LOC_Os02g02390 0.8471141711506405 70 LOC_Os01g47450.1 carboxy-terminal processing peptidase (CtpA) LOC_Os01g47450 0.8469447007656126 71 LOC_Os01g70520.1 Beta-glucosidase 5 OS=Oryza sativa subsp. japonica (sp|q5jk35|bgl05_orysj : 1006.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 332.9) BGLU11, LOC_Os01g70520 0.8460563534041314 72 LOC_Os02g42960.1 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1q1|tl203_arath : 293.0) LOC_Os02g42960 0.8460107476112849 73 LOC_Os04g52520.4 APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 451.0) APO1, LOC_Os04g52520 0.8459817424909903 74 LOC_Os06g47940.1 scaffold protein NFU of plastidial SUF system transfer phase ATCNFU3, NFU3, LOC_Os06g47940 0.8458092215573597 75 LOC_Os08g36140.1 PSA2 protein involved in PS-I assembly EDA3, LOC_Os08g36140 0.8454229747271118 76 LOC_Os03g64020.1 component PGRL1-like of cyclic electron flow PGR5/PGRL1 complex PGR5-LIKE A, LOC_Os03g64020 0.8451406872906501 77 LOC_Os06g11140.1 NAD(P)H dehydrogenase (NDC) NDC1, LOC_Os06g11140 0.8431777706538506 78 LOC_Os05g40180.1 photosynthetic acclimation STN8 kinase. protein kinase (STN) STN8, LOC_Os05g40180 0.842049162171933 79 LOC_Os05g29760.1 ferrochelatase FC-II, FC2, ATFC-II, LOC_Os05g29760 0.840724471223478 80 LOC_Os06g20320.1 nascent polypeptide chaperone (TF) LOC_Os06g20320 0.8385760423930062 81 LOC_Os05g03000.2 TerC protein involved in PS-II assembly ATTERC, PDE149, LOC_Os05g03000 0.8377487230357151 82 LOC_Os04g58780.1 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 964.0) LOC_Os04g58780 0.8370865432687221 83 LOC_Os09g34000.1 no hits & (original description: none) LOC_Os09g34000 0.8363613344189095 84 LOC_Os07g36390.1 plastidial mRNA processing factor (CRP1) LOC_Os07g36390 0.8355646707827463 85 LOC_Os01g73580.1 acid beta-fructofuranosidase (CWIN) ATBFRUCT1, ATCWINV1, LOC_Os01g73580 0.8351637342793553 86 LOC_Os02g01150.1 hydroxypyruvate reductase HPR, ATHPR1, LOC_Os02g01150 0.8348828212548077 87 LOC_Os02g56219.1 plastidial Nat-type N-terminal acetylase LOC_Os02g56219 0.834374973081771 88 LOC_Os02g57030.1 no hits & (original description: none) LOC_Os02g57030 0.8336177206096305 89 LOC_Os03g30092.1 HCF222 protein involved in cytochrome b6/f complex assembly LOC_Os03g30092 0.8330625187590515 90 LOC_Os04g25400.2 7-hydroxymethyl chlorophyll(ide) a reductase LOC_Os04g25400 0.8330021912534674 91 LOC_Os09g09320.1 no hits & (original description: none) LOC_Os09g09320 0.8323689048976688 92 LOC_Os12g42300.1 proton:potassium cation antiporter (KEA) ATKEA3, KEA3, LOC_Os12g42300 0.832229416249075 93 LOC_Os01g37820.1 no hits & (original description: none) LOC_Os01g37820 0.8320973053233219 94 LOC_Os09g39180.1 RNA editing factor (CP31) ATRBP31, CP31, ATRBP33, RBP31, LOC_Os09g39180 0.8320880839797644 95 LOC_Os11g38020.1 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana (sp|q0wtb4|y3725_arath : 150.0) LOC_Os11g38020 0.8319102485810255 96 LOC_Os07g06450.1 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana (sp|q39061|cp33_arath : 204.0) PDE322, CP33, LOC_Os07g06450 0.8316392894117808 97 LOC_Os09g02214.1 proton:sodium cation antiporter (NHD) NHD1, ATNHD1, LOC_Os09g02214 0.8301574312835308 98 LOC_Os02g50010.1 APO protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4a5|apo2_arath : 442.0) emb1629, APO2, LOC_Os02g50010 0.8301060298574346 99 LOC_Os08g33820.1 component LHCa4 of LHC-I complex CAB4, LHCA4, LOC_Os08g33820 0.8301044861041075 100