Sequence Description Alias PCC hrr LOC_Os06g30380.1 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 538.0) LOC_Os06g30380 0.9175009794727647 2 LOC_Os03g31150.3 RAP domain-containing protein, chloroplastic OS=Oryza sativa subsp. japonica (sp|q84mh1|rap_orysj : 1013.0) ATRAP, RAP, LOC_Os03g31150 0.9104454988377776 2 LOC_Os04g52100.1 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, LOC_Os04g52100 0.8810610426056155 5 LOC_Os02g02390.1 no hits & (original description: none) LOC_Os02g02390 0.8807724910450717 9 LOC_Os11g41910.1 no hits & (original description: none) emb2738, LOC_Os11g41910 0.8793407376375328 5 LOC_Os03g12000.1 DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica (sp|q10pv9|rh47b_orysj : 1096.0) ISE1, EMB1586, LOC_Os03g12000 0.8770093833584502 6 LOC_Os04g39060.2 CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana (sp|q8l7c2|cfm2_arath : 511.0) ATCFM2, CFM2, LOC_Os04g39060 0.876500206645459 15 LOC_Os05g35540.1 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1f6|dgp3_arath : 458.0) LOC_Os05g35540 0.8749737162835068 21 LOC_Os06g20320.1 nascent polypeptide chaperone (TF) LOC_Os06g20320 0.8727093121540658 12 LOC_Os08g09270.1 plastidial RNA processing factor (PPR287) LOC_Os08g09270 0.8669981696485388 10 LOC_Os03g58540.1 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica (sp|q851q6|obgc2_orysj : 890.0) CPSAR1, EMB269, ATOBGC, LOC_Os03g58540 0.8618482465881128 13 LOC_Os03g52640.2 no hits & (original description: none) LOC_Os03g52640 0.8606810286149208 35 LOC_Os03g01830.1 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica (sp|q0dvx2|rh50_orysj : 1155.0) LOC_Os03g01830 0.8603919347218986 27 LOC_Os03g11310.1 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana (sp|q84j46|pp262_arath : 509.0) emb2076, LOC_Os03g11310 0.8582468260380302 14 LOC_Os07g06450.1 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana (sp|q39061|cp33_arath : 204.0) PDE322, CP33, LOC_Os07g06450 0.8572088416117215 21 LOC_Os04g51280.1 RNA editing factor (MORF) LOC_Os04g51280 0.8517012402133425 16 LOC_Os03g55164.1 ATP synthase complex assembly factor (BFA1). transcription factor (WRKY) LOC_Os03g55164 0.8512808429685337 17 LOC_Os06g02120.1 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana (sp|o04647|pp399_arath : 655.0) EMB976, LOC_Os06g02120 0.8471839647812833 18 LOC_Os07g11280.2 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 865.0) EMB2654, LOC_Os07g11280 0.8446052420069927 19 LOC_Os03g61030.1 TAC13 cofactor of plastid-encoded RNA polymerase PTAC13, LOC_Os03g61030 0.8436587328624802 20 LOC_Os02g17360.1 protein-only ribonuclease (RNase P) PRORP1, LOC_Os02g17360 0.843156165637312 21 LOC_Os07g47300.1 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica (sp|a2ypr8|obgc1_orysi : 1028.0) CPSAR1, EMB269, ATOBGC, LOC_Os07g47300 0.8405971951197473 22 LOC_Os07g04230.1 transcription factor (mTERF) EMB2219, LOC_Os07g04230 0.8379892746509701 38 LOC_Os02g33500.1 threonine-tRNA ligase EMB2761, LOC_Os02g33500 0.8366316428195366 27 LOC_Os01g69120.1 no hits & (original description: none) LOC_Os01g69120 0.8360665363858262 25 LOC_Os11g43600.1 PrfA-type translation peptide chain release factor APG3, LOC_Os11g43600 0.8354695334313786 31 LOC_Os07g38300.1 RRF translation ribosome recycling factor AtcpRRF, HFP108, cpRRF, RRF, LOC_Os07g38300 0.8290128109933897 30 LOC_Os05g05480.1 protease (Deg) DEGP2, LOC_Os05g05480 0.8254908174023912 67 LOC_Os11g26160.1 basal transcription factor (Sigma) ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, LOC_Os11g26160 0.8240628625136506 40 LOC_Os01g32350.1 proteolytic core component ClpP1/3-6 of chloroplast Clp-type protease complex CLPP3, NCLPP3, LOC_Os01g32350 0.8238201036776354 30 LOC_Os03g45400.1 no hits & (original description: none) LOC_Os03g45400 0.8210270662670454 97 LOC_Os07g40120.1 plastidial mRNA processing factor (PPR10) LOC_Os07g40120 0.8209410452512628 32 LOC_Os11g32880.1 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana (sp|f4jfj3|y3206_arath : 871.0) LOC_Os11g32880 0.8206960917585935 33 LOC_Os01g59510.1 ribonuclease (RNC1) LOC_Os01g59510 0.8205726775013547 34 LOC_Os01g72800.1 component cpFtsY of thylakoid membrane SRP insertion system FRD4, CPFTSY, LOC_Os01g72800 0.8203607154921629 82 ChrSy.fgenesh.mRNA.28 subunit beta of Cpn60 chaperonin complex. component CPN60b of CPN60 assembly chaperone complex. chaperone (Hsp60) 0.8196652951158617 36 LOC_Os04g58780.1 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 964.0) LOC_Os04g58780 0.8181225846851997 37 LOC_Os05g44330.5 Protein DJ-1 homolog C OS=Arabidopsis thaliana (sp|q8vy09|dj1c_arath : 425.0) LOC_Os05g44330 0.8165408816928593 92 LOC_Os12g37610.1 no hits & (original description: none) RFC3, LOC_Os12g37610 0.8153588673940574 39 LOC_Os04g58410.1 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana (sp|o65607|msh3_arath : 86.7) LOC_Os04g58410 0.8152665445311539 58 LOC_Os01g74190.1 no hits & (original description: none) LOC_Os01g74190 0.8146003029365213 80 LOC_Os01g20110.1 Uncharacterized protein At4g37920 OS=Arabidopsis thaliana (sp|q84wn0|y4920_arath : 419.0) LOC_Os01g20110 0.8145235672525379 42 LOC_Os07g32590.1 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, LOC_Os07g32590 0.8136126896442655 43 LOC_Os05g45920.1 plastidial mRNA chaperone (RLSB/BSF) LOC_Os05g45920 0.8130366553212304 44 LOC_Os02g47360.1 OTP51 plastidial RNA splicing factor OTP51, LOC_Os02g47360 0.8112672333362176 45 LOC_Os02g50560.1 RNA helicase (ISE2) ISE2, PDE317, EMB25, LOC_Os02g50560 0.8043133166897811 69 LOC_Os04g39410.1 RNA editing factor (OTP86) OTP86, LOC_Os04g39410 0.8042039595242231 47 LOC_Os02g27070.1 Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana (sp|q3edf8|ppr28_arath : 330.0) LOC_Os02g27070 0.8041871870218394 48 LOC_Os10g36530.1 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana (sp|o65607|msh3_arath : 90.1) LOC_Os10g36530 0.8022910784743151 49 LOC_Os05g49920.1 RNA editing factor (ECB2/VAC1) VAC1, ECB2, ATECB2, LOC_Os05g49920 0.7997496747409514 50 LOC_Os01g67570.1 PAP3/TAC10 cofactor of plastid-encoded RNA polymerase PTAC10, PDE312, LOC_Os01g67570 0.7995026242954324 71 LOC_Os02g35750.1 splicing factor (WSL4) LOC_Os02g35750 0.7991634762857971 52 LOC_Os08g37700.1 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana (sp|q39061|cp33_arath : 109.0) LOC_Os08g37700 0.7977953767860874 53 LOC_Os08g15460.1 component SecY1 of thylakoid membrane Sec1 translocation system SCY1, LOC_Os08g15460 0.7976764932355117 84 LOC_Os02g55630.1 TAC17 cofactor of plastid-encoded RNA polymerase PTAC17, LOC_Os02g55630 0.7954601982275257 55 LOC_Os03g57840.1 plastidial protease (EGY) EGY1, LOC_Os03g57840 0.79515777445901 56 LOC_Os07g18720.1 no hits & (original description: none) LOC_Os07g18720 0.7920167437166444 57 LOC_Os07g36390.1 plastidial mRNA processing factor (CRP1) LOC_Os07g36390 0.7895909306634435 93 LOC_Os04g54320.1 assembly factor CRR9 involved in NDH complex assembly LOC_Os04g54320 0.7889594240474129 60 LOC_Os03g29730.1 no hits & (original description: none) LOC_Os03g29730 0.7886034430010681 61 LOC_Os08g41090.1 ascorbate peroxidase (APX) APX6, LOC_Os08g41090 0.7879361421065214 62 LOC_Os12g10640.1 no hits & (original description: none) LOC_Os12g10640 0.7858822071143522 63 LOC_Os05g12130.1 RNA editing factor (ECD1) EMB2261, LOC_Os05g12130 0.7826309032403431 67 LOC_Os09g24530.1 lysine N-methyltransferase involved in RuBisCo regulation LOC_Os09g24530 0.7822905886944114 68 LOC_Os03g40020.1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 786.0) MEE40, LOC_Os03g40020 0.7821170580065779 69 LOC_Os10g42700.1 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana (sp|o82290|skl2_arath : 353.0) SKL2, LOC_Os10g42700 0.780324289850046 71 LOC_Os02g50010.1 APO protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4a5|apo2_arath : 442.0) emb1629, APO2, LOC_Os02g50010 0.7791337638274392 73 LOC_Os06g04530.1 proteolytic component ClpP2 of mitochondrion Clp-type protease complex CLP2, CLPR2, NCLPP2, LOC_Os06g04530 0.778787422846023 85 LOC_Os01g72980.1 no hits & (original description: none) LOC_Os01g72980 0.7780238859868988 75 LOC_Os05g47850.1 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays (sp|a7xn92|cfm3_maize : 443.0) EMB1865, LOC_Os05g47850 0.7769182931889222 76 LOC_Os10g39930.1 carotenoid epsilon ring hydroxylase CYP97C1, LUT1, LOC_Os10g39930 0.7768629077996465 77 LOC_Os03g04390.1 Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana (sp|o49619|pp350_arath : 714.0) LOC_Os03g04390 0.7762835152740909 78 LOC_Os06g09880.1 Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana (sp|q5g1s8|pp241_arath : 1422.0) EMB1270, LOC_Os06g09880 0.7758368595275151 79 LOC_Os10g32300.1 PYG7 protein involved in PS-I assembly LOC_Os10g32300 0.7755915621552227 80 LOC_Os04g46010.1 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana (sp|q8lps6|ppr3_arath : 404.0) LOC_Os04g46010 0.7689820721290124 84 LOC_Os06g45370.1 Fructose-1,6-bisphosphatase, chloroplastic OS=Spinacia oleracea (sp|p22418|f16p1_spiol : 268.0) & Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 246.1) LOC_Os06g45370 0.768888243282617 85 LOC_Os10g32540.1 PAP1/TAC3 cofactor of plastid-encoded RNA polymerase PTAC3, LOC_Os10g32540 0.7686549243759714 86 LOC_Os03g11120.1 methionine-tRNA ligase OVA1, LOC_Os03g11120 0.7683039175586533 87 LOC_Os12g35630.1 EF-Ts translation elongation factor emb2726, LOC_Os12g35630 0.7672229504425718 90 LOC_Os07g09370.1 RNA editing factor (CRR28) CRR28, LOC_Os07g09370 0.7667452183340706 91 LOC_Os03g16430.1 basal transcription factor (Sigma) ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, LOC_Os03g16430 0.7652850254033546 92 LOC_Os09g30100.1 no hits & (original description: none) LOC_Os09g30100 0.7650633752369965 94 LOC_Os05g49220.1 GTPase ERA-like, chloroplastic OS=Oryza sativa subsp. japonica (sp|b9fi63|era_orysj : 447.0) LOC_Os05g49220 0.7629263544159943 95 LOC_Os03g59264.1 lectin chaperone (CRT) LOC_Os03g59264 0.7620497975468914 96 LOC_Os06g01400.1 glycine-tRNA ligase EDD, EDD1, LOC_Os06g01400 0.760755984309672 98 LOC_Os04g32560.1 chaperone component ClpC of chloroplast Clp-type protease complex HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, LOC_Os04g32560 0.7604398239017652 100