Sequence Description Alias PCC hrr LOC_Os06g30380.1 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana (sp|q8w4i6|bpg2_arath : 538.0) LOC_Os06g30380 0.9083789583679306 4 LOC_Os05g35540.1 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana (sp|q8h1f6|dgp3_arath : 458.0) LOC_Os05g35540 0.9062197999244266 4 LOC_Os03g58540.1 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica (sp|q851q6|obgc2_orysj : 890.0) CPSAR1, EMB269, ATOBGC, LOC_Os03g58540 0.9009330671578016 3 LOC_Os03g52640.2 no hits & (original description: none) LOC_Os03g52640 0.8983920415083889 13 LOC_Os01g47450.1 carboxy-terminal processing peptidase (CtpA) LOC_Os01g47450 0.8946553688593375 5 LOC_Os03g11310.1 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana (sp|q84j46|pp262_arath : 509.0) emb2076, LOC_Os03g11310 0.8941330352826998 6 LOC_Os08g33900.1 no hits & (original description: none) LOC_Os08g33900 0.8870621523989483 10 LOC_Os07g04230.1 transcription factor (mTERF) EMB2219, LOC_Os07g04230 0.8863967237419582 8 LOC_Os03g12000.1 DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica (sp|q10pv9|rh47b_orysj : 1096.0) ISE1, EMB1586, LOC_Os03g12000 0.882782696395852 9 LOC_Os07g30200.1 asparagine-tRNA ligase ATNS1, NS1, OVA8, LOC_Os07g30200 0.8798373301678027 12 LOC_Os03g22430.1 non-proteolytic core component ClpR of chloroplast Clp-type protease complex LOC_Os03g22430 0.8792660197694349 41 LOC_Os04g58780.1 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana (sp|q0wmy5|pp365_arath : 964.0) LOC_Os04g58780 0.8789870708570972 12 LOC_Os02g35750.1 splicing factor (WSL4) LOC_Os02g35750 0.8774994577810746 13 LOC_Os02g46750.1 no hits & (original description: none) LOC_Os02g46750 0.8766081139692373 14 LOC_Os01g43120.1 DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica (sp|q5zbh5|rh25_orysj : 980.0) LOC_Os01g43120 0.876500206645459 15 LOC_Os09g26190.1 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana (sp|q8vyd6|pp374_arath : 496.0) LOC_Os09g26190 0.8762223616051308 16 LOC_Os01g55290.2 Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana (sp|q8lg95|pp332_arath : 280.0) emb1417, LOC_Os01g55290 0.8759381151497161 17 LOC_Os03g45400.1 no hits & (original description: none) LOC_Os03g45400 0.8758510521393861 25 LOC_Os02g53770.1 isoleucine-tRNA ligase OVA2, LOC_Os02g53770 0.8747898346476239 19 LOC_Os01g69120.1 no hits & (original description: none) LOC_Os01g69120 0.8746783835927482 20 LOC_Os01g72800.1 component cpFtsY of thylakoid membrane SRP insertion system FRD4, CPFTSY, LOC_Os01g72800 0.8731170768599195 25 LOC_Os07g36390.1 plastidial mRNA processing factor (CRP1) LOC_Os07g36390 0.8723027294029909 22 LOC_Os06g20320.1 nascent polypeptide chaperone (TF) LOC_Os06g20320 0.8721822654303233 23 LOC_Os02g02390.1 no hits & (original description: none) LOC_Os02g02390 0.8716209213965179 24 LOC_Os01g37870.4 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana (sp|q0wvv0|ppr31_arath : 660.0) LOC_Os01g37870 0.8716161602180315 25 LOC_Os10g36530.1 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana (sp|o65607|msh3_arath : 90.1) LOC_Os10g36530 0.8684036016153455 26 LOC_Os11g41910.1 no hits & (original description: none) emb2738, LOC_Os11g41910 0.8679123492024803 27 LOC_Os01g74190.1 no hits & (original description: none) LOC_Os01g74190 0.8655952785609979 28 LOC_Os05g29760.1 ferrochelatase FC-II, FC2, ATFC-II, LOC_Os05g29760 0.864054583455198 29 LOC_Os07g48970.1 Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica (sp|q10mj1|cgep_orysj : 932.0) LOC_Os07g48970 0.8620287101970905 30 LOC_Os12g29990.1 mitochondrial tRNA threonylcarbamoyl transferase GCP1, LOC_Os12g29990 0.8612925732537868 31 LOC_Os07g10540.1 no description available(sp|q8ry11|ampp2_arath : 904.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 686.4) LOC_Os07g10540 0.8611479941055087 32 LOC_Os03g17634.1 Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana (sp|q8gyl7|pp361_arath : 590.0) LOC_Os03g17634 0.8607526799142966 33 LOC_Os02g49326.1 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 159.4) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum (sp|p94026|rbcmt_tobac : 94.0) LOC_Os02g49326 0.8601441747695701 34 LOC_Os03g64350.1 Rhodanese-like domain-containing protein 8, chloroplastic OS=Arabidopsis thaliana (sp|f4i933|str8_arath : 434.0) LOC_Os03g64350 0.8571903177901975 35 LOC_Os05g44330.5 Protein DJ-1 homolog C OS=Arabidopsis thaliana (sp|q8vy09|dj1c_arath : 425.0) LOC_Os05g44330 0.8569965295261095 36 LOC_Os01g04860.1 Protein root UVB sensitive 5 OS=Arabidopsis thaliana (sp|b6idh3|rus5_arath : 364.0) RUS5, LOC_Os01g04860 0.8551661998044229 37 LOC_Os06g02120.1 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana (sp|o04647|pp399_arath : 655.0) EMB976, LOC_Os06g02120 0.8546639885993835 38 LOC_Os03g06740.1 glutathione reductase (GR) GR, EMB2360, ATGR2, LOC_Os03g06740 0.8541773693158985 39 LOC_Os06g01460.1 no hits & (original description: none) LOC_Os06g01460 0.8540628718041229 55 LOC_Os05g45920.1 plastidial mRNA chaperone (RLSB/BSF) LOC_Os05g45920 0.8528136813938679 41 LOC_Os04g58410.1 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana (sp|o65607|msh3_arath : 86.7) LOC_Os04g58410 0.8514749594125468 42 LOC_Os03g05806.1 rRNA pseudouridine synthase (RsuA) SVR1, LOC_Os03g05806 0.8506950052478064 43 LOC_Os03g01830.1 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica (sp|q0dvx2|rh50_orysj : 1155.0) LOC_Os03g01830 0.850563766757667 44 LOC_Os08g07540.1 adaptor component ClpF of chloroplast Clp-type protease complex LOC_Os08g07540 0.8504327412092443 45 LOC_Os09g24670.1 no hits & (original description: none) LOC_Os09g24670 0.8486817388106273 46 LOC_Os02g50560.1 RNA helicase (ISE2) ISE2, PDE317, EMB25, LOC_Os02g50560 0.8486362763274319 47 LOC_Os05g01750.1 tRNA pseudouridine synthase (TruB) LOC_Os05g01750 0.848293052369707 48 LOC_Os01g37820.1 no hits & (original description: none) LOC_Os01g37820 0.8476650972179396 49 LOC_Os08g44290.1 RNA editing factor (CP31) ATRBP31, CP31, ATRBP33, RBP31, LOC_Os08g44290 0.8469360353827813 87 LOC_Os04g52520.4 APO protein 1, chloroplastic OS=Arabidopsis thaliana (sp|q9xir4|apo1_arath : 451.0) APO1, LOC_Os04g52520 0.8436355220689475 56 LOC_Os08g15460.1 component SecY1 of thylakoid membrane Sec1 translocation system SCY1, LOC_Os08g15460 0.843535948699655 52 LOC_Os08g07060.1 assembly factor CRR6 involved in NDH complex assembly CRR6, LOC_Os08g07060 0.8429551703590987 65 LOC_Os07g11280.2 Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana (sp|q8rws8|pp199_arath : 865.0) EMB2654, LOC_Os07g11280 0.841115226987611 54 LOC_Os02g39040.1 transcription factor (mTERF) LOC_Os02g39040 0.8398033147945639 55 LOC_Os05g32220.1 component psRPL1 of large ribosomal subunit proteome LOC_Os05g32220 0.8396952527952909 56 LOC_Os02g20490.1 no hits & (original description: none) LOC_Os02g20490 0.8390905262742874 75 LOC_Os01g45370.1 no hits & (original description: none) LOC_Os01g45370 0.8372972910316564 58 LOC_Os02g07350.1 Phosphatase IMPL1, chloroplastic OS=Arabidopsis thaliana (sp|q94f00|impl1_arath : 474.0) & Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 176.4) IMPL1, LOC_Os02g07350 0.8361579916863031 59 LOC_Os11g13420.1 no hits & (original description: none) LOC_Os11g13420 0.8361043288625609 76 LOC_Os05g50980.1 PAP7/TAC14 cofactor of plastid-encoded RNA polymerase PTAC14, LOC_Os05g50980 0.8349158922086124 61 LOC_Os04g52100.1 M24-class methionyl aminopeptidase (MAP1) MAP1C, MAP1B, LOC_Os04g52100 0.833588697685927 62 LOC_Os07g06450.1 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana (sp|q39061|cp33_arath : 204.0) PDE322, CP33, LOC_Os07g06450 0.8335602165621484 63 LOC_Os08g25700.1 no hits & (original description: none) LOC_Os08g25700 0.8334135269844324 64 LOC_Os02g17360.1 protein-only ribonuclease (RNase P) PRORP1, LOC_Os02g17360 0.8320458079317382 65 LOC_Os04g46100.1 no hits & (original description: none) LOC_Os04g46100 0.8290017936519617 67 LOC_Os12g13460.1 [Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic OS=Arabidopsis thaliana (sp|q9xi84|rbcmt_arath : 83.6) LOC_Os12g13460 0.8285278477357977 68 LOC_Os04g51280.1 RNA editing factor (MORF) LOC_Os04g51280 0.8279492071949334 69 LOC_Os05g05480.1 protease (Deg) DEGP2, LOC_Os05g05480 0.8267590343068304 70 LOC_Os11g38020.1 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana (sp|q0wtb4|y3725_arath : 150.0) LOC_Os11g38020 0.8265690211105955 71 LOC_Os02g07360.1 ndhA-specific mRNA splicing factor. plastidial RNA processing factor (PPR287) LOC_Os02g07360 0.8252511302831687 99 LOC_Os04g55050.1 component GatA of glutamyl-tRNA-dependent amidotransferase complex LOC_Os04g55050 0.8246098783881367 73 LOC_Os03g40020.1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana (sp|q9lff1|pp281_arath : 786.0) MEE40, LOC_Os03g40020 0.8241435140917752 74 LOC_Os05g33290.1 no hits & (original description: none) LOC_Os05g33290 0.8234438179917702 88 LOC_Os11g32880.1 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana (sp|f4jfj3|y3206_arath : 871.0) LOC_Os11g32880 0.8229643017744392 76 LOC_Os11g34180.1 manganese/calcium cation transporter (BICAT) LOC_Os11g34180 0.8224312897322553 80 LOC_Os02g07250.1 no hits & (original description: none) LOC_Os02g07250 0.8211623779083712 78 LOC_Os07g09370.1 RNA editing factor (CRR28) CRR28, LOC_Os07g09370 0.8210963098904689 79 LOC_Os05g28500.1 Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana (sp|q0wnn7|pp176_arath : 404.0) LOC_Os05g28500 0.8205259031103429 80 LOC_Os08g02390.1 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea (sp|p28644|roc1_spiol : 98.6) LOC_Os08g02390 0.8201610378469947 81 LOC_Os02g49820.1 RNA editing factor (ORRM) LOC_Os02g49820 0.819913774430387 82 LOC_Os05g12130.1 RNA editing factor (ECD1) EMB2261, LOC_Os05g12130 0.8192714195191745 83 LOC_Os07g12640.1 dihydroxyacetone phosphate reductase (SFD1) GLY1, SFD1, LOC_Os07g12640 0.818923446633254 84 LOC_Os10g37330.1 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana (sp|q56y42|plr1_arath : 548.0) LOC_Os10g37330 0.8187600035568778 85 LOC_Os03g08570.1 phytoene desaturase (PDS) PDS3, PDS, PDE226, LOC_Os03g08570 0.8181065366100355 86 LOC_Os02g33500.1 threonine-tRNA ligase EMB2761, LOC_Os02g33500 0.8180142120321402 87 LOC_Os01g14810.1 no hits & (original description: none) LOC_Os01g14810 0.8175170440176533 88 LOC_Os11g37990.1 CFM3-type plastidial RNA splicing factor ATCFM3A, CFM3A, LOC_Os11g37990 0.8174055379236418 89 LOC_Os05g33500.1 transcription factor (mTERF). mTERF4 plastidial RNA splicing factor LOC_Os05g33500 0.816757824501547 90 LOC_Os01g70400.1 component PnsB5/NDH18 of NDH subcomplex B NDH18, LOC_Os01g70400 0.8165760591359005 92 LOC_Os08g25900.1 PPL1 protein involved in PS-II assembly PPL1, LOC_Os08g25900 0.8141855990982436 93 LOC_Os05g49920.1 RNA editing factor (ECB2/VAC1) VAC1, ECB2, ATECB2, LOC_Os05g49920 0.8136507307243177 94 LOC_Os01g57410.3 Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana (sp|q3edf8|ppr28_arath : 403.0) LOC_Os01g57410 0.8131868618749678 95 LOC_Os03g16430.1 basal transcription factor (Sigma) ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1, LOC_Os03g16430 0.8128964791802192 97 LOC_Os03g59264.1 lectin chaperone (CRT) LOC_Os03g59264 0.8120763794411461 98 LOC_Os11g36440.1 carotenoid isomerase (CrtISO) CRTISO, CCR2, LOC_Os11g36440 0.8118911658390876 99