Sequence Description Alias PCC hrr Cre06.g300700 0.92049087824 9 Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component CH42, CHLI1, CH-42, CHL11, CHLI-1 0.914118961452 17 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.911922290864 14 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein LIL3:1 0.904507199376 12 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase GSA2 0.896797599984 14 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase GGPS1 0.895360590803 11 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 0.884419538357 7 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.883585533536 23 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 0.883105688531 20 Cre01.g014000 0.88298846845 10 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana GDC1 0.882438371955 11 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.880223408805 27 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME1 0.878218950394 39 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.875124878773 20 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.873468200307 15 Cre03.g156600 Glutamyl-tRNA reductase-binding protein, chloroplastic OS=Arabidopsis thaliana 0.87196739899 33 Cre03.g145207 RPH1 0.869468764955 18 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 0.867456843784 19 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 0.863958554277 33 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana FdC2 0.863267700978 20 Cre06.g303700 0.86277919001 42 Cre13.g576760 0.862487732633 22 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC 0.862344916972 31 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 0.861426273529 24 Cre04.g213100 0.860941764908 25 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 54CP, SRP54CP, CPSRP54, FFC 0.858713644316 26 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase HEMB1 0.852257012094 27 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 0.849835794523 34 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component CH42, CHLI1, CH-42, CHL11, CHLI-1 0.844836767367 42 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase CHLM 0.844029070475 30 Cre07.g328075 0.842845084459 31 Cre03.g208050 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.hydroxyacyl-ACP dehydratase (ptHD) 0.835873691375 32 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.832764561389 33 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 0.829320550467 34 Cre13.g602350 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase 0.828023752668 35 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.827422993697 39 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor GUN4 0.826411767351 37 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) FLU 0.826025345844 38 Cre02.g074100 0.825803826083 39 Cre17.g715500 0.825126619612 40 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component FRD4, CPFTSY 0.824355405539 45 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase ISPD, ATMEPCT, MCT 0.821326921402 63 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase PYR6 0.820052531537 43 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component EMB3003 0.817863659055 48 Cre03.g171100 0.817842974585 45 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V 0.813579204641 67 Cre05.g243050 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin TRXF2, ATF2 0.811371908354 47 Cre03.g209841 0.810632621174 48 Cre17.g732250 0.810226627212 49 Cre07.g321300 0.810216271858 50 Cre10.g438550 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Tha4 component 0.804812974891 52 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 0.803907215466 53 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II KAS2, ATKAS2, FAB1 0.80333225027 70 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ATCDPMEK, CDPMEK, PDE277, ISPE 0.80325698851 55 Cre12.g510050 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component ACSF, CHL27, CRD1 0.801102125131 56 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA 0.801078660009 78 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR POR C, PORC 0.797573405787 58 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 0.796427887586 77 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein TLP18.3 0.794654449502 60 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.793117536667 85 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter SAMT1, SAMC1 0.790702833691 62 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase THFS 0.783343488734 70 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.780825166523 82 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.7798157768 65 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.778852792476 73 Cre08.g369000 0.778394208154 68 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii EMB1995, LPAT1, ATS2 0.777887095442 69 Cre13.g602650 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 0.777471291844 70 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) ATPRX Q 0.777302046384 71 Cre03.g146167 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HHL1 protein 0.776357938947 84 Cre11.g475850 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA2 protein EDA3 0.775789278377 73 Cre01.g052100 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL18 component 0.775207715323 74 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 0.775145607552 75 Cre16.g679300 0.77280242906 76 Cre03.g156050 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor AtcpRRF, HFP108, cpRRF, RRF 0.770215776095 78 Cre16.g651923 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CrtISO carotenoid isomerase CRTISO, CCR2 0.769790269662 79 Cre06.g284600 0.769337856636 80 Cre03.g172000 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP reductase 0.768443347772 81 Cre12.g524500 0.767256471292 90 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component ALB3 0.766709450949 86 Cre13.g581650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component 0.765866852987 84 Cre09.g393173 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein ELIP, ELIP1 0.764892685015 90 Cre03.g195650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS10 component 0.760357897064 86 Cre15.g636750 GSTF8, ATGSTF8, GST6, ATGSTF5 0.758456280324 87 Cre13.g580350 0.754878083627 89 Cre17.g726450 0.751217957147 90 Cre12.g557050 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana YLMG2, ATYLMG2 0.749893100791 91 Cre11.g476750 Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii ATRFNR1, RFNR1 0.748902736559 92 Cre01.g039750 Protein biosynthesis.organelle translation machineries.peptide deformylation.PDF formylmethionine deformylase DEF2, ATDEF2, PDF1B 0.746916934177 94 Cre13.g588100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst ROC2 0.746701618486 95 Cre12.g509050 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.PPL1 protein PPL1 0.746096191186 96 Cre01.g017300 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component 0.744421799567 97 Cre17.g720250 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component LHCB4.3 0.741775149933 98 Cre12.g494450 30S ribosomal protein S16, chloroplastic OS=Staurastrum punctulatum 0.739950015398 99