Sequence Description Alias PCC hrr Cre09.g392505 0.935138268292 2 Cre17.g711457 0.918477597854 23 Cre06.g251951 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component 0.911187665167 16 Cre11.g477250 0.90855966801 4 Cre07.g319000 0.904731984484 63 Cre16.g678452 0.902636437689 24 Cre10.g465850 0.902410981163 14 Cre07.g338602 DNA damage response.DNA repair polymerase activities.DNA polymerase eta (POLH) POLH 0.902189538781 27 Cre12.g559300 0.900900005288 21 Cre18.g749347 0.900394288772 10 Cre06.g299450 0.900283979489 11 Cre02.g142900 0.900046272318 12 Cre06.g278189 0.899483380166 13 Cre10.g449950 0.899445574677 25 Cre06.g285850 0.898916017657 20 Cre09.g410300 0.898631418396 25 Cre03.g159750 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-II complex.VPS36 component 0.898493608811 17 Cre09.g386800 0.897541918172 18 Cre13.g568700 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component TGH 0.897466646582 68 Cre08.g382900 0.89731582907 20 Cre06.g277700 Protein modification.N-linked glycosylation.dolichol-phosphate biosynthesis.dolichol kinase 0.896678807096 38 Cre03.g171250 0.895252937471 38 Cre01.g040250 0.89461966939 23 Cre12.g500400 0.894300226278 35 Cre17.g734050 0.894239325427 79 Cre13.g579700 0.894010343092 47 Cre09.g401367 DNA damage response.BRCC DNA-damage response complex.BRCC45 component 0.894008891091 63 Cre01.g002700 0.893549313094 28 Cre02.g113700 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpF adaptor component 0.893182534468 29 Cre14.g619500 0.892864123929 30 Cre02.g103600 0.892562786816 31 Cre09.g390900 0.891510269419 35 Cre13.g563350 0.89148020207 70 Cre10.g420150 0.890469788661 34 Cre07.g328550 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component 0.890297388322 70 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A 0.88980846325 36 Cre07.g317800 SEC15A 0.889757259071 37 Cre08.g363450 0.889609844012 38 Cre02.g083300 0.889576649404 39 Cre16.g686173 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.8895265002 40 Cre04.g225950 TAF1B, TAF1, HAF2 0.889419047978 47 Cre07.g326010 0.888728368398 60 Cre06.g281526 0.888536055925 57 Cre06.g268150 Protein modification.phosphorylation.NEK kinase ATNEK2, NEK2 0.885983047137 45 Cre12.g531150 Nucleotide metabolism.pyrimidines.salvage pathway.ribokinase 0.88571027112 46 Cre12.g548152 Solute transport.carrier-mediated transport.MC-type solute transporter 0.885665350744 47 Cre18.g748597 0.884939567548 50 Cre04.g228500 0.884796809491 54 Cre16.g676500 0.884651345514 68 Cre01.g003500 0.88208560846 55 Cre03.g205000 0.881509961738 54 Cre12.g490250 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor TTN1, TFC D, EMB133, CHO 0.879838784259 55 Cre02.g083700 0.879650365722 67 Cre16.g695300 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component AtHPR1, AtTHO1, THO1, HPR1 0.879390607281 57 Cre01.g051100 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component SKIP 0.879275257473 79 Cre07.g330550 0.879109968909 59 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor HAT3.1 0.878955870187 85 Cre13.g562400 B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana HSI2, VAL1 0.878941466985 61 Cre10.g441600 0.878875847697 62 Cre12.g490750 0.878505047249 63 Cre01.g030450 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.878309900343 83 Cre06.g278145 0.876986754052 68 Cre12.g535350 0.876597696193 99 Cre12.g488100 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component ATUPF3, UPF3 0.876450724413 71 Cre02.g075850 Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica SRK2E, ATOST1, SNRK2-6, SNRK2.6, OST1, P44 0.876363438183 72 Cre11.g482483 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component 0.876350591189 73 Cre08.g375000 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase DSPTP1 0.87598784582 74 Cre12.g549002 0.875368369156 95 Cre07.g317650 0.874393326981 79 Cre01.g012450 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1 0.874175461676 95 Cre01.g057791 0.873544749382 83 Cre03.g171461 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemN oxygen-independent coproporphyrinogen III oxidase 0.873185858435 85 Cre09.g391319 0.872540761766 87 Cre14.g632550 0.872278301608 88 Cre12.g539050 0.871875271535 89 Cre16.g685950 0.871678588858 91 Cre10.g441800 0.871083605363 92 Cre02.g095101 0.871007000965 100 Cre12.g507250 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana EMB2763 0.87062818299 94 Cre06.g293650 0.87038005727 95 Cre08.g381900 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase 0.869932797344 96 Cre10.g452200 0.869849580144 97 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component CHB3, ATSWI3D 0.869752017059 98