Sequence Description Alias PCC hrr Cre12.g506650 0.95054141667 1 Cre02.g142700 0.941129159918 2 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.931387992979 7 Cre14.g633100 0.930013939982 4 Cre09.g400664 0.927984786237 5 Cre07.g319000 0.924781661225 12 Cre01.g015050 0.921574413576 27 Cre14.g618860 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component SRCAP, PIE1, chr13 0.920532317078 22 Cre03.g189605 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component 0.920274468899 9 Cre10.g425501 Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica HAF01, HAC13, TAF1, HAF1, GTD1 0.919821545134 17 Cre12.g499750 0.918516742426 11 Cre17.g745547 0.91703504424 17 Cre06.g291750 0.915679199063 23 Cre03.g171250 0.915466656447 14 Cre09.g403182 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone GTB1 0.915041158363 15 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component RID3 0.913976682265 27 Cre04.g220600 0.913964884923 17 Cre07.g313500 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 0.91381378569 18 Cre02.g086887 Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 0.913125589023 19 Cre02.g143587 0.912702434882 20 Cre17.g715850 0.911006963269 27 Cre17.g711100 0.909470896608 22 Cre04.g225950 TAF1B, TAF1, HAF2 0.909328203057 23 Cre01.g051100 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component SKIP 0.909148499153 24 Cre16.g676400 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp5 RNA helicase 0.908725518571 25 Cre16.g694208 0.908581345616 26 Cre13.g568700 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component TGH 0.908009525596 42 Cre01.g003450 0.907832190224 28 Cre03.g151550 0.906674447488 30 Cre06.g302150 0.90654242844 47 Cre06.g292650 0.905175086069 32 Cre17.g744797 0.904795232782 33 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase ATHDA19, HDA1, HD1, ATHD1, HDA19, RPD3A 0.904119018926 34 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor HAT3.1 0.903704734436 35 Cre02.g120350 0.903677041562 49 Cre17.g711457 0.903587555064 56 Cre07.g336750 0.9028446876 38 Cre08.g385150 0.901693313815 83 Cre05.g246200 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 48.6) 0.901667414922 40 Cre10.g438950 0.900835176232 41 Cre17.g743947 0.900462209044 42 Cre11.g468356 0.900383405773 52 Cre09.g396326 0.900311407998 44 Cre10.g430850 0.899537696497 45 Cre01.g012450 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL1 0.899260012103 46 Cre12.g493550 0.89865041587 47 Cre15.g636650 0.898519221335 48 Cre02.g143600 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.898345122611 49 Cre10.g459700 0.897295535098 50 Cre06.g311450 0.896669091969 51 Cre17.g712200 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP2, ATUBP2 0.896291351684 52 Cre03.g199750 0.896252595922 53 Cre09.g398030 0.896163890942 69 Cre13.g572050 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR 0.896061789071 55 Cre04.g228500 0.89590162385 56 Cre14.g628800 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.1 protease ATSBT6.1, S1P, ATS1P 0.89589951018 57 Cre08.g372050 0.89549315718 58 Cre06.g309050 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.895268553865 59 Cre03.g204950 0.893986055502 60 Cre12.g535350 0.893677466208 61 Cre03.g199550 0.893057428175 62 Cre14.g623150 0.892322774453 65 Cre12.g487600 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component EMB1265, ATCPSF100, CPSF100, ESP5 0.89182524674 66 Cre01.g053360 0.89163390067 67 Cre06.g270600 0.89127820793 68 Cre01.g048850 0.890243452774 69 Cre16.g686650 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM ligase E3 protein 0.889504386498 70 Cre12.g500900 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1) SIZ1, ATSIZ1 0.888899080353 71 Cre12.g524100 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component 0.888731776055 72 Cre16.g661400 0.888630078627 73 Cre14.g632950 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.887770332805 76 Cre12.g552650 0.887520819291 77 Cre12.g518150 0.887392513149 78 Cre10.g465850 0.887362029986 79 Cre12.g537671 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKR1, CHR4 0.887031634756 80 Cre01.g018200 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.886955728469 81 Cre16.g684100 Protein SWEETIE OS=Arabidopsis thaliana SWEETIE 0.886767196441 82 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component CHB3, ATSWI3D 0.886702216259 83 Cre09.g413650 0.88622197639 84 Cre06.g251951 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component 0.885905231265 85 Cre02.g091000 Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana 0.885494112623 91 Cre16.g691050 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana PRAF1 0.885460319395 87 Cre13.g604600 0.885116032182 88 Cre02.g078150 0.884985089479 89 Cre06.g293650 0.884802691426 90 Cre01.g030450 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.884017058185 92 Cre14.g612150 Protein HESO1 OS=Arabidopsis thaliana 0.883744277753 93 Cre13.g587800 0.883618801949 94 Cre08.g378500 0.883049398447 95 Cre01.g010150 0.883041175865 96 Cre16.g664750 0.881799482499 98 Cre06.g277500 0.881559633307 99 Cre15.g640800 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BDP1 component 0.881360095108 100