Sequence Description Alias PCC hrr Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.857222594684 8 Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.83988651762 2 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase SPS1 0.839129506149 7 Cre07.g320450 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein ELIP, ELIP1 0.831266547627 7 Cre06.g281250 0.827238173693 5 Cre03.g144184 0.79561328123 11 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana ATNAP9, NAP9 0.794618527486 10 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.787507424638 10 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 0.782286662074 11 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.765867983681 18 Cre01.g016750 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein NPQ4, PSBS 0.756487069497 11 Cre09.g394325 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein ELIP2 0.754672399781 12 Cre08.g360801 0.740436309654 13 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) G-TMT, VTE4, TMT1 0.729198641039 29 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component DET1, ATDET1, FUS2 0.727133428248 15 Cre03.g145567 0.722535842224 16 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.71923353114 25 Cre08.g379550 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter ANTR1, PHT4;1 0.716928388939 18 Cre09.g407200 Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.711643748654 19 Cre08.g381516 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.703328187189 20 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH1 0.702182519731 27 Cre04.g221550 0.696863169515 22 Cre07.g320400 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein ELIP, ELIP1 0.695445076669 23 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana SPA2 0.693369099177 24 Cre13.g564900 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter AtABCC2, ABCC2, ATMRP2, EST4, MRP2 0.692723898889 31 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component PGR5 0.681568315539 26 Cre06.g263550 0.68123475615 27 Cre16.g690350 0.674075772892 36 Cre17.g715700 Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana 0.671628917355 29 Cre02.g085050 E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana FUS1, EMB168, DET340, ATCOP1, COP1 0.670555632554 38 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase BETA-OHASE 1, chy1, B1, BCH1 0.635891081965 41 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 0.631232326025 64 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC 0.626005118534 86 Cre17.g733174 0.619981011124 38 Cre08.g358540 0.609529730247 68 Cre09.g401701 0.609365769991 42 Cre08.g360850 0.607644337073 67 Cre09.g400404 0.604532372672 45 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein PSB29, THF1 0.584874980023 100 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri CRY3 0.583743097431 91 Cre08.g380000 0.57721614102 48 Cre07.g342100 0.567443746857 90 Cre04.g213152 0.565696957002 55 Cre13.g583050 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana ACD1, PAO, LLS1 0.565058355842 71 Cre08.g365900 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LhcSR-dependent machinery.LhcSR protein LHCA2 0.564176958324 57 Cre13.g571580 0.551348798646 60 Cre06.g251150 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein OHP2 0.539714282889 65 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 0.527496246679 100 Cre02.g110300 0.515503828041 77 Cre09.g395650 0.510994571843 81 Cre17.g721700 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.499275813128 92 Cre07.g315150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.RBD1 protein 0.488286941444 99