Sequence Description Alias PCC hrr Cre12.g510800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component CH42, CHLI1, CH-42, CHL11, CHLI-1 0.951213662675 7 Cre03.g199535 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein LIL3:1 0.926717775746 7 Cre02.g073700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.925700085594 7 Cre02.g076300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME1 0.924433843326 12 Cre05.g242000 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component V157, PDE166, ALB1, CHLD, ALB-1V 0.92442568929 9 Cre06.g300700 0.921193500215 8 Cre01.g046652 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.918761650628 7 Cre06.g294750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG CHLG, G4, ATG4 0.917326257718 12 Cre13.g576760 0.916408624215 9 Cre01.g050950 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP 0.914380067334 14 Cre16.g663900 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase HEMC 0.914152491438 12 Cre03.g158000 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase GSA2 0.908461542002 12 Cre06.g251900 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component ALB3 0.905824142627 13 Cre06.g306300 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component CH42, CHLI1, CH-42, CHL11, CHLI-1 0.902969879107 17 Cre11.g479750 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 54CP, SRP54CP, CPSRP54, FFC 0.901883455001 15 Cre05.g246800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor GUN4 0.901629249768 16 Cre05.g241450 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component FRD4, CPFTSY 0.901259827206 17 Cre12.g524300 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.896446510703 18 Cre12.g484200 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.geranylgeranyl pyrophosphate synthase GGPS1 0.89430281712 19 Cre16.g674300 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone 0.893491302886 20 Cre01.g015350 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.protochlorophyllide oxidoreductase (POR) activities.light-dependent POR POR C, PORC 0.893384728114 21 Cre06.g303700 0.892446136246 22 Cre07.g313700 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase ERS, OVA3, ATERS 0.892151019811 23 Cre02.g091050 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase HEMB1 0.892098450144 24 Cre02.g105650 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein 0.89125228526 25 Cre09.g396300 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase PPOX, HEMG1, PPO1 0.889979381806 26 Cre03.g145207 RPH1 0.887477947889 27 Cre16.g679669 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol synthase ISPD, ATMEPCT, MCT 0.880485789035 28 Cre06.g286250 Solute transport.carrier-mediated transport.MC-type solute transporter SAMT1, SAMC1 0.877327964963 29 Cre03.g174750 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.87710917792 30 Cre12.g551950 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana GDC1 0.873646017388 31 Cre16.g650050 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.872668661807 32 Cre17.g702200 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone AKR2B 0.87196739899 33 Cre10.g460050 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase regulator protein (FLU) FLU 0.871776097203 34 Cre16.g661350 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.867721458043 35 Cre02.g092600 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.867576511601 36 Cre07.g328200 PsbP domain-containing protein 5, chloroplastic OS=Arabidopsis thaliana 0.867207953776 37 Cre10.g430150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA1 protein 0.865897163412 38 Cre12.g542202 Protein-ribulosamine 3-kinase, chloroplastic OS=Oryza sativa subsp. japonica 0.865141166593 39 Cre05.g233305 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein ATSULA, GC1, SULA 0.862855504768 40 Cre07.g335300 Lipid metabolism.fatty acid synthesis.plastidial Type II fatty acid synthase (ptFAS) system.ketoacyl-ACP synthase activities.ketoacyl-ACP synthase II KAS2, ATKAS2, FAB1 0.860965156841 41 Cre12.g498550 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase CHLM 0.856480250292 42 Cre03.g194450 Phytohormones.abscisic acid.synthesis.NXD1 neoxanthin synthesis cofactor 0.856306297662 43 Cre01.g042800 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase PCB2 0.849654847102 44 Cre11.g467700 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.uroporphyrinogen III decarboxylase HEME2 0.843166590123 45 Cre05.g243050 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin TRXF2, ATF2 0.84076018264 46 Cre07.g328075 0.839769572811 47 Cre12.g510050 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX monomethylester cyclase complex.CRD1 catalytic component ACSF, CHL27, CRD1 0.838147776386 48 Cre13.g566000 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.10-formyl-THF synthetase THFS 0.83589388262 49 Cre09.g416200 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.83246231367 50 Cre04.g213100 0.829898445425 51 Cre10.g457650 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component 0.828683623728 52 Cre02.g093450 Enzyme classification.EC_4 lyases.EC_4.1 carbon-carbon lyase(50.4.1 : 437.0) & Fructose-bisphosphate aldolase 4, cytosolic OS=Arabidopsis thaliana 0.827864797061 53 Cre08.g362900 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PPD1 protein 0.827562791494 54 Cre10.g422300 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) ATPRX Q 0.827299312568 55 Cre04.g231026 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component CPSRP43, CAO 0.827124333568 56 Cre12.g524500 0.82645492537 57 Cre16.g681900 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecY1 component SCY1 0.825713439226 75 Cre16.g656650 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.825200116405 59 Cre03.g183400 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PSA3 protein 0.824077726871 60 Cre17.g715500 0.822563213641 61 Cre07.g334800 Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana FdC2 0.820910871277 62 Cre03.g209841 0.820805275576 63 Cre03.g158900 Lipid metabolism.fatty acid synthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E2 dihydrolipoamide acetyltransferase component EMB3003 0.817702185824 64 Cre06.g255500 0.817273781838 65 Cre12.g492350 0.811743968214 66 Cre06.g268600 External stimuli response.temperature.Csd (cold-shock-domain) protein GRP2B, ATGRP2B, ATCSP4 0.811498698122 67 Cre08.g369000 0.810534247291 68 Cre01.g037850 Lipid metabolism.fatty acid synthesis.acetyl-CoA carboxylation.acetyl-CoA carboxylase regulator (BADC) 0.809484602743 69 Cre01.g051500 0.807751357966 70 Cre02.g145050 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ATCDPMEK, CDPMEK, PDE277, ISPE 0.806572749803 71 Cre10.g452050 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa4-type component CAB4, LHCA4 0.805864814005 72 Cre10.g438650 Nucleotide metabolism.pyrimidines.phosphotransfers.uridylate kinase PYR6 0.803206008656 73 Cre07.g342150 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase HEMA1 0.802957719121 74 Cre07.g325736 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 0.799298450399 75 Cre17.g732250 0.798237278677 76 Cre02.g111450 0.798145753446 77 Cre10.g452100 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY 0.797185699219 78 Cre13.g602650 Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana 0.796792940345 79 Cre03.g182150 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein TLP18.3 0.795633509337 80 Cre10.g439350 0.792385865903 81 Cre10.g443500 0.790468886558 82 Cre06.g269100 0.788209461165 83 Cre07.g325500 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor CCH1, GUN5, CHLH, CCH, ABAR 0.78781863194 84 Cre10.g454250 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.787782990516 85 Cre12.g514200 Protein HOTHEAD OS=Arabidopsis thaliana EDA17, HTH 0.786597428642 86 Cre14.g625000 0.786169183484 87 Cre03.g206550 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.78521063057 88 Cre10.g435850 0.784816554738 89 Cre01.g014000 0.78455631465 90 Cre17.g720250 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component LHCB4.3 0.784446738001 91 Cre17.g696350 0.783765084645 92 Cre06.g284600 0.783189579183 93 Cre03.g187450 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 0.783073284554 94 Cre09.g398289 1-acyl-sn-glycerol-3-phosphate acyltransferase CHLREDRAFT_174358 OS=Chlamydomonas reinhardtii EMB1995, LPAT1, ATS2 0.783006406604 95 Cre11.g467770 Cellular respiration.glycolysis.cytosolic glycolysis.phosphoglycerate kinase 0.781863133668 96 Cre13.g602350 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase 0.781801225212 97 Cre06.g278213 Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum CAB4, LHCA4 0.780459410575 98 Cre10.g425900 Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana CAB4, LHCA4 0.775292328671 99 Cre12.g530100 0.775182224215 100