Sequence Description Alias PCC hrr Cre12.g519300 0.821348406777 3 Cre09.g398252 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.807500490549 3 Cre14.g624350 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) G-TMT, VTE4, TMT1 0.804050220059 6 Cre10.g429800 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH10, ATABC1, ABC1 0.802765464254 5 Cre03.g145567 0.793545080681 5 Cre06.g283750 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.HST homogentisate solanesyltransferase HST, ATHST, PDS2 0.79186542306 23 Cre03.g167051 Coenzyme metabolism.pyridoxalphosphate synthesis.pyridoxal 5-phosphate synthase complex.glutaminase component EMB2407, ATPDX2, PDX2 0.790967397003 13 Cre06.g266900 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.788654620079 8 Cre01.g016150 0.778957916404 9 Cre08.g384650 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.775539798298 12 Cre14.g610850 0.774556805439 11 Cre02.g078939 Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri CRY3 0.763970473328 12 Cre10.g444550 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.761044026207 16 Cre10.g439000 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.760859045157 14 Cre13.g565650 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase SPS1 0.758679914426 21 Cre06.g274650 0.756985508986 16 Cre17.g731050 ABC transporter I family member 20 OS=Arabidopsis thaliana ATNAP9, NAP9 0.752916922395 23 Cre13.g580300 ABC transporter I family member 19 OS=Arabidopsis thaliana 0.752756891078 18 Cre01.g055151 0.75269801446 19 Cre01.g037700 Acyl-lipid (7-3)-desaturase, chloroplastic OS=Chlamydomonas reinhardtii 0.747935942335 20 Cre17.g720050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH8 0.7444756842 21 Cre12.g558550 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.744069164523 22 Cre16.g686350 0.73605729972 40 Cre05.g242400 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGR5-like component PGR5 0.729109120004 24 Cre13.g587500 Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica 0.727649974483 25 Cre01.g053850 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana SPA2 0.727232415439 26 Cre08.g372850 0.725626343789 53 Cre12.g507650 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.725197227823 65 Cre03.g207150 0.724353382742 29 Cre05.g246552 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.723951622935 36 Cre13.g571560 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DET1 regulator component DET1, ATDET1, FUS2 0.719528027222 31 Cre03.g176350 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.718843363775 32 Cre09.g393950 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana 0.717772317978 54 Cre01.g032750 0.717755580044 48 Cre06.g250100 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein cpHsc70-1 0.717424039362 35 Cre07.g339750 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.ferrochelatase FC-II, FC2, ATFC-II 0.716388102627 38 Cre08.g358538 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC 0.716289844713 37 Cre01.g038600 Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.omega-3/omega-6 fatty acid desaturase FAD7, FADD 0.71410699418 38 Cre13.g562850 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein PSB29, THF1 0.710517378624 39 Cre06.g278263 Embryogenesis-associated protein EMB8 OS=Picea glauca 0.707986010401 80 Cre01.g028600 Tropinone reductase homolog At2g29290 OS=Arabidopsis thaliana 0.707337272887 42 Cre15.g643600 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-B component ATNAP1, ATABC1, ABC1, LAF6 0.705794533247 71 Cre14.g615950 ABC transporter F family member 3 OS=Arabidopsis thaliana ATGCN4, GCN4 0.70573427231 59 Cre09.g393913 Coenzyme metabolism.tetrahydrofolate synthesis.pterin synthesis.GTP-cyclohydrolase I 0.700689262402 46 Cre13.g570350 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH13, OSA1, ATH13, ATOSA1 0.696246612985 67 Cre03.g144164 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease ARASP 0.696080128595 51 Cre03.g181400 Coenzyme metabolism.tetrahydrofolate synthesis.p-aminobenzoate synthesis.aminodeoxychorismate synthase emb1997, ADCS 0.691575765473 53 Cre02.g088500 0.690994396634 54 Cre16.g676550 0.688406018413 98 Cre09.g412300 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Pam16 component 0.687007844204 67 Cre04.g215050 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.xanthophyll synthesis.carotenoid beta ring hydroxylase BETA-OHASE 1, chy1, B1, BCH1 0.685525587324 58 Cre06.g261500 0.685394504727 59 Cre01.g021800 0.684288867923 69 Cre16.g690350 0.679958495137 63 Cre17.g729800 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component ALB3 0.678990701333 64 Cre04.g225050 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic20-I/IV component 0.678470279323 65 Cre09.g411200 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein 0.67792405132 66 Cre03.g197650 FIB4 0.677511239751 67 Cre17.g740950 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.674586409874 69 Cre03.g195850 Peptide methionine sulfoxide reductase B1, chloroplastic OS=Oryza sativa subsp. japonica MSRB1, ATMSRB1 0.67399857804 71 Cre08.g381516 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.673904340652 72 Cre06.g286350 0.672935621997 88 Cre06.g273700 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein HCF136 0.672261250842 75 Cre10.g461900 Probable voltage-gated potassium channel subunit beta OS=Arabidopsis thaliana 0.671810588918 76 Cre03.g195200 0.669763245223 78 Cre02.g143450 0.669147989867 80 Cre03.g144184 0.66770015688 81 Cre08.g358540 0.66690560131 82 Cre12.g485800 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component FTSH1 0.666188930391 83 Cre06.g267600 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-e lycopene epsilon cyclase LUT2 0.665458632427 85 Cre08.g360850 0.664088354746 86 Cre04.g213251 Puromycin-sensitive aminopeptidase OS=Oryza sativa subsp. japonica 0.660699529152 87 Cre16.g672385 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate aminotransferase HISN6B 0.658999648083 90 Cre04.g211850 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.three-helix LHC-related protein group.ELIP protein 0.657297341326 93 Cre03.g173350 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone AKR2B 0.651405450896 96 Cre03.g145587 Uncharacterized protein At5g50100, chloroplastic OS=Arabidopsis thaliana 0.651317190171 97 Cre02.g142146 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.650948312825 99