Sequence Description Alias PCC hrr Cpa|evm.model.tig00000806.35 0.9566175925313828 1 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana 0.9552132429401076 4 Cpa|evm.model.tig00000378.18 0.95059309796606 9 Cpa|evm.model.tig00021616.13 0.9494729272249195 7 Cpa|evm.model.tig00001215.19 0.9441596249712024 5 Cpa|evm.model.tig00020723.64 0.9438335163127397 14 Cpa|evm.model.tig00021721.8 0.9433756841552942 22 Cpa|evm.model.tig00001487.8 0.9427963695629522 8 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.9409965960792095 27 Cpa|evm.model.tig00000254.94 0.9387832131743182 25 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum 0.9364491396476018 14 Cpa|evm.model.tig00000949.24 ATCCD1, CCD1, NCED1, ATNCED1 0.9361608449786367 24 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum PHR2 0.9347069405874933 13 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana 0.9341670651288906 27 Cpa|evm.model.tig00000344.14 0.9337414691576954 15 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.9315538780805436 23 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.9292524853646811 40 Cpa|evm.model.tig00022075.74 0.9277296799448057 23 Cpa|evm.model.tig00000821.30 0.9273678210718074 36 Cpa|evm.model.tig00021493.41 0.92346350527414 24 Cpa|evm.model.tig00021127.131 0.9222488759218613 42 Cpa|evm.model.tig00020710.126 0.9208488656575293 22 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum CRY3 0.9177849409420195 26 Cpa|evm.model.tig00021617.18 0.9166670335592109 24 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar ATCCD1, CCD1, NCED1, ATNCED1 0.9140355723774015 48 Cpa|evm.model.tig00021254.26 0.9137276466629831 37 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana 0.9137032076693501 27 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana NDA2 0.9122362571688284 28 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana 0.9121846347252229 29 Cpa|evm.model.tig00020557.25 0.9113922133962907 54 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.9109583065737235 31 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana ATABCC5, MRP5, ATMRP5, ABCC5 0.9101377648643976 59 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase TPK2 0.9093984180357997 33 Cpa|evm.model.tig00020560.15 0.908274580063984 34 Cpa|evm.model.tig00000057.44 0.9081784963640734 50 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.9070908341164619 36 Cpa|evm.model.tig00020951.45 0.9065647569787768 37 Cpa|evm.model.tig00021680.19 0.9059649992469359 38 Cpa|evm.model.tig00001126.7 0.9058480628244068 77 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana 0.9052602765303563 68 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana 0.9036361825664905 41 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.9001707086100406 42 Cpa|evm.model.tig00021374.35 0.8996511211808602 63 Cpa|evm.model.tig00000955.24 0.899612160476762 69 Cpa|evm.model.tig00001310.4 0.8993363462128201 51 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.8988729181250205 46 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana 0.8981301897989805 65 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana RUS1 0.8977076778627788 48 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATPREP1, PREP1, ATZNMP 0.8976702028205539 65 Cpa|evm.model.tig00021312.29 MO1 0.8971977019218624 50 Cpa|evm.model.tig00020554.147 PPL1 0.8971894189051579 51 Cpa|evm.model.tig00000248.21 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana UPF1, ATUPF1, LBA1 0.8965596820405927 52 Cpa|evm.model.tig00021135.14 0.895920699148674 53 Cpa|evm.model.tig00001155.24 Protein NCA1 OS=Arabidopsis thaliana 0.8946903585468697 67 Cpa|evm.model.tig00000042.42 0.8932435935886583 55 Cpa|evm.model.tig00001657.7 0.8910145372801279 93 Cpa|evm.model.tig00021494.27 0.8907491508599006 57 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATPREP2, PREP2 0.8904716024548839 58 Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 0.8898954431791286 90 Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 0.8897751766644059 98 Cpa|evm.model.tig00000551.6 0.889764725910029 61 Cpa|evm.model.tig00000361.26 0.8896954059241133 62 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8877967386549178 63 Cpa|evm.model.tig00020553.66 0.8874995483972951 64 Cpa|evm.model.tig00020851.8 0.8865379428869087 65 Cpa|evm.model.tig00001490.9 0.8864558368978549 66 Cpa|evm.model.tig00020516.14 0.8864425118328482 67 Cpa|evm.model.tig00000691.29 0.8863736197047899 68 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana 0.8849143573160165 69 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana TIC55-II 0.8825595759116164 88 Cpa|evm.model.tig00020553.74 0.8823360187699012 71 Cpa|evm.model.tig00021435.52 0.88113611678246 72 Cpa|evm.model.tig00000863.33 0.8795451866097398 74 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8795178847893648 75 Cpa|evm.model.tig00000157.5 Solute transport.carrier-mediated transport.MC-type solute transporter SAMC2 0.8792498369699826 76 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.8784783353440294 77 Cpa|evm.model.tig00000670.24 0.876911598137757 79 Cpa|evm.model.tig00000640.27 0.8768174504273809 80 Cpa|evm.model.tig00000269.112 0.8767597396468192 81 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana 0.8762356862601433 82 Cpa|evm.model.tig00000248.71 0.8759256518351229 83 Cpa|evm.model.tig00020660.34 NDC1 0.8756759846866368 84 Cpa|evm.model.tig00022104.1 0.8735867589985878 85 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.8733474548559162 86 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana ATCRY2, CRY2, PHH1, AT-PHH1, FHA 0.8725491913801958 91 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana 0.8723875667892962 88 Cpa|evm.model.tig00000254.110 0.8718340134050099 89 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana ATMRP12, MRP12, ABCC11 0.8709109245063915 91 Cpa|evm.model.tig00000093.172 0.8704185926780531 92 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.8701119787572111 93 Cpa|evm.model.tig00000551.3 0.8698827111373076 94 Cpa|evm.model.tig00000821.53 RBL1, ATRBL1 0.869067983459049 95 Cpa|evm.model.tig00000079.6 0.8686626935379672 96 Cpa|evm.model.tig00000383.32 Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. japonica CCH1, GUN5, CHLH, CCH, ABAR 0.8678478086039457 97 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor 0.8678158177734785 98 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.8677018109606389 99 Cpa|evm.model.tig00000981.5 0.8676572144090856 100