Sequence Description Alias PCC hrr Cpa|evm.model.tig00000704.58 Lipid metabolism.glycerolipid synthesis.phosphatidylglycerol.CDP-diacylglycerol synthase ATCDS1, CDS1 0.9458926787479861 1 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component SKIP 0.9426183628495444 2 Cpa|evm.model.tig00000944.34 CID4 0.9344936765874171 3 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.9330144093996144 4 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein 0.9308771948965591 7 Cpa|evm.model.tig00020544.6 0.9303382226269931 6 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein 0.9295882641880626 7 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9275808094355025 11 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter 0.9192831485588502 9 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.9160000120969539 22 Cpa|evm.model.tig00000829.22 Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana 0.9147992244129927 11 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase UGP2, AtUGP2 0.9142561189585268 12 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana 0.9139156835135503 13 Cpa|evm.model.tig00001234.12 0.9101139548635071 14 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.9101118847653333 15 Cpa|evm.model.tig00021123.42 0.9100839208092307 16 Cpa|evm.model.tig00021357.6 0.9081560437737636 17 Cpa|evm.model.tig00001049.9 UGP1, AtUGP1, UGP 0.9069136043974053 18 Cpa|evm.model.tig00020554.13 0.9039800671040039 19 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.903813658627724 20 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.902314604872293 28 Cpa|evm.model.tig00000704.40 0.9019487206861123 32 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.8997826432798665 23 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.8988960989182616 57 Cpa|evm.model.tig00000789.42 0.8982497471649004 25 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) AXL 0.8979780245366605 31 Cpa|evm.model.tig00000194.23 0.8971594743303873 28 Cpa|evm.model.tig00000478.39 0.893784415222398 28 Cpa|evm.model.tig00020848.42 0.8934288337104499 29 Cpa|evm.model.tig00021357.26 0.8933264584359117 39 Cpa|evm.model.tig00001038.20 0.8933202693105624 31 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155 0.8914608016201354 32 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8913047950687323 33 Cpa|evm.model.tig00000704.59 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8912767489174482 34 Cpa|evm.model.tig00021682.8 Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica CBP20, ATCBP20 0.889824774969039 35 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.8889918535881061 39 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component EER5 0.8888459393059213 37 Cpa|evm.model.tig00021352.49 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.8888305147519563 38 Cpa|evm.model.tig00001424.4 0.8879866001129927 42 Cpa|evm.model.tig00021350.40 0.8879723228633841 40 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica ESR, ESP, TASTY 0.8878953617492683 41 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.8874754196502584 55 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.884975974947873 44 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor MSI1, MEE70, ATMSI1 0.8834200537199877 45 Cpa|evm.model.tig00001049.11 0.8831985064894661 46 Cpa|evm.model.tig00001372.8 0.8831891708127075 47 Cpa|evm.model.tig00001107.1 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component 0.8831513804609639 48 Cpa|evm.model.tig00020531.35 0.883053744419474 66 Cpa|evm.model.tig00001265.10 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase TRM10, AtTRM 0.8825040169232465 50 Cpa|evm.model.tig00000704.63 0.8797746696774035 51 Cpa|evm.model.tig00020554.42 0.8789302266588562 53 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein ATG3, ATATG3 0.8783831722189046 54 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase ATSPP, SPP 0.8761086307095566 55 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.8760341193757006 56 Cpa|evm.model.tig00000037.36 0.8754264740150576 57 Cpa|evm.model.tig00000842.16 0.8754213083445438 58 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.8752035513095879 59 Cpa|evm.model.tig00021464.37 Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica RHD3 0.8748536801661306 60 Cpa|evm.model.tig00021589.4 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme ATISA3, ISA3 0.8748382117311327 61 Cpa|evm.model.tig00000912.29 0.8746433492284261 62 Cpa|evm.model.tig00021348.94 0.874604901397807 97 Cpa|evm.model.tig00000319.24 0.8745878856111846 64 Cpa|evm.model.tig00000350.15 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.MRE11 component ATMRE11, MRE11 0.87457875662377 65 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.8743660551956277 67 Cpa|evm.model.tig00021612.56 0.8742083533705756 67 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) 0.8742008868987142 68 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.8735645669174876 69 Cpa|evm.model.tig00020684.29 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 240.9) & Isoaspartyl peptidase/L-asparaginase OS=Lupinus luteus 0.8735165576295864 70 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit 0.8734758288023798 71 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor AtTLP3, TLP3 0.8724050582431567 72 Cpa|evm.model.tig00020538.10 Calmodulin OS=Helianthus annuus ACAM-6, CAM6 0.8718046447340932 73 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.8716807933511282 74 Cpa|evm.model.tig00021464.8 Oxysterol-binding protein-related protein 4C OS=Arabidopsis thaliana ORP4C 0.8702945155830836 75 Cpa|evm.model.tig00000829.23 Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica ATGWD3, OK1, PWD 0.8701635364174587 76 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana SMP2 0.8695184702047001 77 Cpa|evm.model.tig00021319.37 0.8694024293642406 78 Cpa|evm.model.tig00000037.4 0.8688904057083838 79 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8687158733359476 80 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.8686040774390442 98 Cpa|evm.model.tig00000217.24 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.8683782387736585 82 Cpa|evm.model.tig00000829.12 0.8674458685951635 83 Cpa|evm.model.tig00000402.8 0.8672207635958727 84 Cpa|evm.model.tig00021352.55 0.8660178384228829 85 Cpa|evm.model.tig00000842.34 0.8659216597410769 86 Cpa|evm.model.tig00021589.34 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.8654411270803748 87 Cpa|evm.model.tig00021591.9 0.8652140140916736 88 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component 0.8651840760809816 89 Cpa|evm.model.tig00000615.61 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor APUM24, PUM24 0.864746838162012 90 Cpa|evm.model.tig00000203.14 0.8645167801132131 91 Cpa|evm.model.tig00000842.17 0.8643060134699102 92 Cpa|evm.model.tig00001003.41 0.8634203169632995 93 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component 0.8610551356825727 95 Cpa|evm.model.tig00000388.24 0.8609850212541145 96 Cpa|evm.model.tig00020538.9 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.8607529620387214 97 Cpa|evm.model.tig00000241.27 ARF guanine-nucleotide exchange factor GNL2 OS=Arabidopsis thaliana 0.8592051933956347 98 Cpa|evm.model.tig00001229.15 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) 0.8591625809521711 99 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.8590840984057061 100