Sequence Description Alias PCC hrr Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9579725278330928 1 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein 0.9482552235921134 2 Cpa|evm.model.tig00000037.26 0.9437000533985367 3 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.9387870611023598 4 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana 0.9379351701741395 5 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.9338157123230415 6 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.9290774267389699 7 Cpa|evm.model.tig00000037.36 0.9287796171711009 8 Cpa|evm.model.tig00001049.14 RNA biosynthesis.transcriptional activation.TUB transcription factor AtTLP3, TLP3 0.9253037066331636 9 Cpa|evm.model.tig00020554.15 0.9215885233158198 10 Cpa|evm.model.tig00021350.40 0.9199311530401266 11 Cpa|evm.model.tig00021589.6 0.9193591446911741 12 Cpa|evm.model.tig00021357.6 0.9186882144544087 13 Cpa|evm.model.tig00021123.42 0.9181392336239077 14 Cpa|evm.model.tig00000789.40 0.9139759131545515 24 Cpa|evm.model.tig00000863.19 ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Physcomitrella patens subsp. patens 0.9131280445922624 16 Cpa|evm.model.tig00000042.4 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.9123556977712497 17 Cpa|evm.model.tig00021464.50 0.9117590865491233 18 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica ESR, ESP, TASTY 0.9110575519584664 19 Cpa|evm.model.tig00001003.41 0.9084811084544744 20 Cpa|evm.model.tig00000383.36 0.9081821569222305 21 Cpa|evm.model.tig00000829.16 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qc-type SNARE components.SYP6 group protein 0.9057943762372955 22 Cpa|evm.model.tig00000203.14 0.903961732432136 23 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) AXL 0.9034442657989348 24 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.9030765678257746 48 Cpa|evm.model.tig00000037.6 0.9025065278302972 41 Cpa|evm.model.tig00000912.15 0.8996149381749993 27 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana SMP2 0.8993539645863837 28 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 NRPE6A, NRPD6A, NRPB6A 0.897778851409144 29 Cpa|evm.model.tig00020531.35 0.897686294037666 39 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor QQT2 0.8962757242288596 38 Cpa|evm.model.tig00000944.22 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component SKIP 0.8959255142382002 32 Cpa|evm.model.tig00001049.8 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic UDP-glucose pyrophosphorylase UGP2, AtUGP2 0.8953096251554816 33 Cpa|evm.model.tig00001206.18 0.8952319732648424 34 Cpa|evm.model.tig00000704.22 0.8947944078379629 35 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM 0.8943971233265418 85 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit 0.8943858266253448 37 Cpa|evm.model.tig00020903.46 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP11 assembly factor UTP11, EDA14 0.8935776597091801 38 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component ATCBP80, ABH1, ENS, CBP80 0.8933264584359117 39 Cpa|evm.model.tig00021357.13 0.8927557470526005 40 Cpa|evm.model.tig00000388.16 Golgin candidate 5 OS=Arabidopsis thaliana 0.8916581283520241 41 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.8916302584524631 42 Cpa|evm.model.tig00001029.4 0.8914274557614428 43 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8907934607609598 44 Cpa|evm.model.tig00021357.16 0.8892078061461843 45 Cpa|evm.model.tig00000388.17 0.8887805681113514 46 Cpa|evm.model.tig00020554.13 0.8887387855255212 47 Cpa|evm.model.tig00020531.29 0.8870617694984131 48 Cpa|evm.model.tig00000076.107 0.8867224053723786 49 Cpa|evm.model.tig00000037.18 0.886026791036612 50 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.8848744726386837 51 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8846243819085184 56 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.8841244003424404 53 Cpa|evm.model.tig00000194.23 0.883591486687792 54 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.8831158454867636 86 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1 0.8827670967537317 65 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica 0.8819248020273479 57 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.8811218805498008 60 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana TIP1 0.8808274785784002 76 Cpa|evm.model.tig00000615.76 0.8807784757464164 60 Cpa|evm.model.tig00020903.19 0.8799353267944315 61 Cpa|evm.model.tig00021433.26 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.8795718797452091 62 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.8787511620691363 63 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.8784082246520816 78 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides 0.8780363129136215 65 Cpa|evm.model.tig00001372.8 0.8768998182115985 66 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter 0.876802184814491 67 Cpa|evm.model.tig00001545.2 Protein kintoun OS=Chlamydomonas reinhardtii 0.8756099345138284 68 Cpa|evm.model.tig00021464.59 0.8751341878849517 69 Cpa|evm.model.tig00021319.37 0.8747324132208706 70 Cpa|evm.model.tig00001234.12 0.874656901774182 71 Cpa|evm.model.tig00000217.24 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.874341350690352 72 Cpa|evm.model.tig00020554.11 Cytoplasmic dynein 2 light intermediate chain 1 OS=Chlamydomonas reinhardtii 0.8741039446541441 73 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component 0.8739144856229459 74 Cpa|evm.model.tig00001154.32 ATDJC39, ARL2 0.8735603260409491 75 Cpa|evm.model.tig00001229.11 0.8735382772397664 76 Cpa|evm.model.tig00021234.23 Paired amphipathic helix protein Sin3-like 3 OS=Arabidopsis thaliana SNL5 0.8720441241116172 77 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8704754178956622 79 Cpa|evm.model.tig00000944.33 Peptidyl-prolyl cis-trans isomerase CYP65 OS=Arabidopsis thaliana ATPUB49, PUB49 0.8699417403706948 80 Cpa|evm.model.tig00021502.1 0.8699399942671499 81 Cpa|evm.model.tig00020554.12 0.86865465115801 83 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3 0.8679565377460537 84 Cpa|evm.model.tig00000615.67 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Sof1 assembly factor 0.8655572826245919 86 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter 0.8653901305809721 87 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 RPB15.9, RPB15.9.9, NRPB4, ATRPB15.9 0.8650661918253914 88 Cpa|evm.model.tig00000388.24 0.8649826538700122 89 Cpa|evm.model.tig00021612.34 0.8641913716843469 90 Cpa|evm.model.tig00000852.36 0.8641686572129065 91 Cpa|evm.model.tig00001049.9 UGP1, AtUGP1, UGP 0.8633711417398843 92 Cpa|evm.model.tig00021612.56 0.862566766321062 93 Cpa|evm.model.tig00021319.34 0.8623598737761928 94 Cpa|evm.model.tig00021742.3 0.8623348904057849 95 Cpa|evm.model.tig00001003.42 0.8620135827813443 96 Cpa|evm.model.tig00020780.34 0.8609123511852514 97 Cpa|evm.model.tig00020554.26 Cilia- and flagella-associated protein 53 OS=Chlamydomonas reinhardtii 0.8604354618576424 99