Sequence Description Alias PCC hrr Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1 0.9425355520236045 6 Cpa|evm.model.tig00021589.1 0.928024167269105 12 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.9243965908716579 16 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.9227957878211197 15 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9183902303594846 22 Cpa|evm.model.tig00020614.99 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.GPN1/QQT2 nuclear import factor QQT2 0.9146997245717502 10 Cpa|evm.model.tig00001372.8 0.913917106767186 7 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.9128915236675986 10 Cpa|evm.model.tig00020531.35 0.9101309793333349 19 Cpa|evm.model.tig00020544.4 0.9093163682335796 32 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.9088957479448705 20 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.9074649177970733 12 Cpa|evm.model.tig00000037.18 0.9074400522654128 15 Cpa|evm.model.tig00000704.50 0.9057606856880378 28 Cpa|evm.model.tig00021464.50 0.9047808423957946 20 Cpa|evm.model.tig00000037.6 0.9039673972333369 39 Cpa|evm.model.tig00000203.14 0.9034201241763105 20 Cpa|evm.model.tig00021357.2 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD4 component PFD4, AIP3 0.9023145469345243 29 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana APG3 0.9021359935271818 19 Cpa|evm.model.tig00021502.1 0.9017430387493994 20 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM 0.9016574019493859 61 Cpa|evm.model.tig00020531.57 Degreening-related gene dee76 protein OS=Auxenochlorella protothecoides 0.8976353816318475 22 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor ERD2B 0.8974563986277785 28 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase NRS/ER, UER1 0.896350035794767 75 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.8959423518025625 25 Cpa|evm.model.tig00021348.96 ATFKBP42, UCU2, FKBP42, TWD1 0.8944536907512661 26 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.8935269375249519 73 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase LOS4 0.8934458188316805 28 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3 0.8930899628376294 29 Cpa|evm.model.tig00021464.49 Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana 0.8911436827414617 30 Cpa|evm.model.tig00000980.1 0.8892035090146669 31 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia ATU2AF65A 0.8887630308990371 32 Cpa|evm.model.tig00000402.20 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).Ku70-Ku80 helicase complex.KU70 component KU70, ATKU70 0.8887226723323838 33 Cpa|evm.model.tig00001049.12 0.8886428451915286 44 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana 0.887319620522923 80 Cpa|evm.model.tig00000912.27 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8872665207353423 52 Cpa|evm.model.tig00001049.17 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1) 0.8870908586678418 37 Cpa|evm.model.tig00021464.27 0.8854010315137371 42 Cpa|evm.model.tig00020780.13 0.8851787086238693 39 Cpa|evm.model.tig00001003.32 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1S small sigma subunit AP19 0.8832496224301217 40 Cpa|evm.model.tig00020554.15 0.8824549908140336 41 Cpa|evm.model.tig00000241.31 0.8817685359334004 42 Cpa|evm.model.tig00021350.40 0.8806038945493758 43 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana TIP1 0.8797049682836916 80 Cpa|evm.model.tig00020848.18 snRNA-activating protein complex subunit OS=Arabidopsis thaliana 0.8782345924691968 45 Cpa|evm.model.tig00020848.76 0.8780678380072404 62 Cpa|evm.model.tig00000863.20 Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SEC11 catalytic component 0.8774097075658164 51 Cpa|evm.model.tig00021357.26 0.876802184814491 67 Cpa|evm.model.tig00001093.2 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase ATARL1, ARF3, ARL1 0.876522778635262 49 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component emb1220 0.8760976180832287 92 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.873069178416937 68 Cpa|evm.model.tig00000194.23 0.8718736178428954 59 Cpa|evm.model.tig00001206.20 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qa-type SNARE components.SYP4-group protein SYP43, ATSYP43 0.8716409519015068 53 Cpa|evm.model.tig00000704.34 Elongation factor 2 OS=Arabidopsis thaliana 0.8707088544493352 61 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component ATEIF3G1, EIF3G1 0.8706037010049894 55 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) AXL 0.8701496744600684 75 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase ERG9, SQS1 0.8697570770258435 78 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8687267354552038 59 Cpa|evm.model.tig00020531.29 0.8683172174026942 60 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8678175893017301 90 Cpa|evm.model.tig00000704.40 0.866463614522304 91 Cpa|evm.model.tig00020553.145 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component TTN8, ATSMC1, SMC1 0.864816188898147 64 Cpa|evm.model.tig00020909.14 Uncharacterized protein At1g03900 OS=Arabidopsis thaliana NAP4, ATNAP4 0.8644546372140509 65 Cpa|evm.model.tig00020903.17 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.8642123656042429 93 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component ATO 0.864078356718133 71 Cpa|evm.model.tig00020538.72 0.8639618383185135 68 Cpa|evm.model.tig00001003.41 0.8637212981300532 69 Cpa|evm.model.tig00001029.17 0.8620071307546496 74 Cpa|evm.model.tig00000194.20 0.8614912528657749 75 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana SMP2 0.8614664927358535 83 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase IPP1 0.8613739760735114 80 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component PSF2 0.8612043738931816 78 Cpa|evm.model.tig00000076.86 0.8608788966127685 79 Cpa|evm.model.tig00021464.54 Synaptonemal complex protein 1 OS=Arabidopsis thaliana 0.8606452287776039 85 Cpa|evm.model.tig00021123.42 0.8599087196416266 97 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8581715911943998 83 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8577520766803179 92 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit HAP13 0.8569080816325348 91 Cpa|evm.model.tig00000217.25 Chromatin structure-remodeling complex protein SYD OS=Arabidopsis thaliana SYD, CHR3 0.8567441107816611 87 Cpa|evm.model.tig00020538.66 0.8564909418428454 88 Cpa|evm.model.tig00000241.28 U2 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana U2A' 0.8561467248072089 90 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana 0.8561325811012491 91 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component 0.8556888216711764 92 Cpa|evm.model.tig00021319.34 0.8556854145771263 93 Cpa|evm.model.tig00020553.149 0.855359259602014 94 Cpa|evm.model.tig00000912.15 0.8547199018517251 95 Cpa|evm.model.tig00020723.4 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF1 PIC assembly factor 0.8521662804806437 98 Cpa|evm.model.tig00021348.91 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.NBS1 component 0.8521397751083414 99 Cpa|evm.model.tig00000704.62 0.8520909868057442 100