Sequence Description Alias PCC hrr Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.9386863720154168 3 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.927199990366266 2 Cpa|evm.model.tig00000640.27 0.9260918777935175 3 Cpa|evm.model.tig00020710.126 0.9226062949487586 4 Cpa|evm.model.tig00000507.13 0.9143013992671263 6 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.9121846347252229 29 Cpa|evm.model.tig00000796.24 0.9121519433738484 22 Cpa|evm.model.tig00020951.45 0.9100807448784669 32 Cpa|evm.model.tig00020660.34 NDC1 0.907821607262772 9 Cpa|evm.model.tig00001215.19 0.9048079021279745 48 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana 0.9038334852101361 57 Cpa|evm.model.tig00021616.13 0.9019285684614403 60 Cpa|evm.model.tig00000786.5 0.9001634049132196 13 Cpa|evm.model.tig00021276.13 0.8951224195829254 14 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATPREP1, PREP1, ATZNMP 0.8950190580455606 71 Cpa|evm.model.tig00000378.18 0.8932824784247189 76 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana 0.8927734416432247 82 Cpa|evm.model.tig00021517.29 0.8919710612903203 19 Cpa|evm.model.tig00020556.13 0.8903686378921978 70 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum 0.8890321587823509 70 Cpa|evm.model.tig00000821.30 0.8889133793903838 82 Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana 0.8868740172951193 30 Cpa|evm.model.tig00021433.17 0.8862839248850037 23 Cpa|evm.model.tig00021721.8 0.8862621497956615 89 Cpa|evm.model.tig00000949.8 0.8848084277750403 25 Cpa|evm.model.tig00000863.53 0.8838195887112582 44 Cpa|evm.model.tig00000057.44 0.8835289699347538 88 Cpa|evm.model.tig00000093.105 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.8826815475950792 100 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.8798212874406445 92 Cpa|evm.model.tig00000254.94 0.8796033775910287 100 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana 0.8785102941261329 91 Cpa|evm.model.tig00020911.37 0.878364160721694 32 Cpa|evm.model.tig00020553.74 0.8777331463092422 40 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana 0.8765371014636462 69 Cpa|evm.model.tig00020723.64 0.8763530906447518 87 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase TPK2 0.8734108047906451 67 Cpa|evm.model.tig00000882.23 0.873321877006803 40 Cpa|evm.model.tig00001374.9 RPH1 0.8733069208774245 41 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana 0.8726536452965455 50 Cpa|evm.model.tig00020553.283 Solute transport.carrier-mediated transport.MC-type solute transporter 0.8724459257321592 51 Cpa|evm.model.tig00000269.112 0.8711157146969528 80 Cpa|evm.model.tig00001487.8 0.8701778083439712 63 Cpa|evm.model.tig00000246.6 0.8698578833731139 59 Cpa|evm.model.tig00000852.34 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.electron input (module N).NQO1 component CI51 0.8697212381889768 48 Cpa|evm.model.tig00021254.2 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.8677476579376858 64 Cpa|evm.model.tig00021435.52 0.8677123806922783 51 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.8675479695469771 83 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.8675072643150815 94 Cpa|evm.model.tig00000169.17 External stimuli response.temperature.Csd (cold-shock-domain) protein 0.8670115671627918 55 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.8669922337319537 98 Cpa|evm.model.tig00000025.11 0.8662888802303975 58 Cpa|evm.model.tig00020941.39 0.8638257460848786 99 Cpa|evm.model.tig00021493.41 0.863513377560988 92 Cpa|evm.model.tig00020934.55 0.8625140992490001 68 Cpa|evm.model.tig00000254.110 0.861943972594727 66 Cpa|evm.model.tig00000367.31 0.8603922556986772 97 Cpa|evm.model.tig00000241.114 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase PHGPX, GPX6, ATGPX6, LSC803 0.8602530721643452 70 Cpa|evm.model.tig00020554.98 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) MAP1D 0.8597728223679528 72 Cpa|evm.model.tig00000655.44 Coenzyme metabolism.FMN/FAD biosynthesis.FAD synthetase (RibF) 0.8591534073892574 79 Cpa|evm.model.tig00021493.51 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana 0.857594332795212 74 Cpa|evm.model.tig00001269.6 0.8573845114776825 75 Cpa|evm.model.tig00000254.128 0.8566225205477402 88 Cpa|evm.model.tig00000863.33 0.8549607999899846 80 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana MSRB5, ATMSRB5 0.8544833201190225 81 Cpa|evm.model.tig00001668.1 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 279.1) 0.8535133284261153 82 Cpa|evm.model.tig00000615.41 0.8531108846933246 83 Cpa|evm.model.tig00000342.41 0.8527822359967957 84 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor 0.8517147378503582 85 Cpa|evm.model.tig00000806.35 0.8514561105390767 94 Cpa|evm.model.tig00020554.147 PPL1 0.8501603982461453 89 Cpa|evm.model.tig00021517.16 0.84916031707733 90 Cpa|evm.model.tig00020930.6 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.8487802412260854 92 Cpa|evm.model.tig00000246.5 0.8479018212657718 93 Cpa|evm.model.tig00021617.18 0.8476395867876402 100 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana ATPREP2, PREP2 0.8473361404098417 95 Cpa|evm.model.tig00000670.24 0.8467250899089458 97 Cpa|evm.model.tig00021108.21 0.8449138280303404 99