Sequence Description Alias PCC hrr Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.944760475318195 23 Cpa|evm.model.tig00000949.24 ATCCD1, CCD1, NCED1, ATNCED1 0.9132319408383955 43 Cpa|evm.model.tig00020560.15 0.9114375388780079 8 Cpa|evm.model.tig00000821.30 0.9061360687385084 60 Cpa|evm.model.tig00021721.8 0.9045854987366673 66 Cpa|evm.model.tig00021332.16 0.9042448684187219 13 Cpa|evm.model.tig00021493.41 0.9038575828699031 47 Cpa|evm.model.tig00000310.32 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.9031855596292179 32 Cpa|evm.model.tig00000670.28 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.900364809584136 28 Cpa|evm.model.tig00000586.13 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein 0.8983993809403241 34 Cpa|evm.model.tig00020952.44 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.8953105329827622 67 Cpa|evm.model.tig00000553.12 0.8931622522615315 38 Cpa|evm.model.tig00000241.135 0.892994502552025 20 Cpa|evm.model.tig00020723.64 0.8911088227597965 74 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum PHR2 0.890780665424268 40 Cpa|evm.model.tig00021579.19 Cryptochrome-1 OS=Arabidopsis thaliana ATCRY2, CRY2, PHH1, AT-PHH1, FHA 0.8901890895958896 67 Cpa|evm.model.tig00000378.18 0.8886947183578 83 Cpa|evm.model.tig00001310.4 0.8875566533366765 66 Cpa|evm.model.tig00000551.3 0.887320262588826 49 Cpa|evm.model.tig00000248.71 0.8872918348728503 60 Cpa|evm.model.tig00020710.126 0.8856326801109337 23 Cpa|evm.model.tig00020553.66 0.8851521594204196 59 Cpa|evm.model.tig00021617.18 0.8846925519954166 51 Cpa|evm.model.tig00000681.17 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana TIC55-II 0.8826617610152491 87 Cpa|evm.model.tig00000383.105 0.8810680911383891 25 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana 0.8807718763916867 80 Cpa|evm.model.tig00000711.69 DNA repair protein RAD5B OS=Arabidopsis thaliana 0.877629496495301 35 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana 0.8741989917491603 99 Cpa|evm.model.tig00021254.26 0.8718598234709416 88 Cpa|evm.model.tig00020554.147 PPL1 0.8703691538026984 33 Cpa|evm.model.tig00021312.29 MO1 0.869463030818228 75 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.8691167365617606 98 Cpa|evm.model.tig00000402.46 0.8687399287341595 79 Cpa|evm.model.tig00020553.74 0.8687176025997942 49 Cpa|evm.model.tig00020553.186 0.8680394219740386 63 Cpa|evm.model.tig00000042.42 0.8677869089522015 83 Cpa|evm.model.tig00000806.35 0.8664047362492595 73 Cpa|evm.model.tig00000955.10 DNA damage response.DNA repair mechanisms.base excision repair (BER).formamidopyrimidine-DNA glycosylase (FPG1) 0.8645134608593911 66 Cpa|evm.model.tig00021254.2 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.8634977270580216 78 Cpa|evm.model.tig00021680.19 0.8596390749678202 44 Cpa|evm.model.tig00000093.172 0.8590417977290526 85 Cpa|evm.model.tig00000383.32 Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa subsp. japonica CCH1, GUN5, CHLH, CCH, ABAR 0.858497419885343 56 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana 0.858364899879474 69 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana NDA2 0.8580433191545394 51 Cpa|evm.model.tig00001258.10 0.8570340917343335 65 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase TPK2 0.8556981273006224 93 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum CRY3 0.855623457810801 92 Cpa|evm.model.tig00000607.15 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase OVA1 0.8551563068341217 55 Cpa|evm.model.tig00001487.8 0.8501595761254065 90 Cpa|evm.model.tig00020930.19 0.8500095909877223 59 Cpa|evm.model.tig00000692.50 0.8477807764776646 61 Cpa|evm.model.tig00021179.22 Nutrient uptake.iron uptake.iron storage.VIT-type iron transporter ATVIT1, VIT1 0.84126368667828 66 Cpa|evm.model.tig00001095.26 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.840838765030589 68 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana 0.8351591415094338 81 Cpa|evm.model.tig00021720.12 0.8346116542227472 75 Cpa|evm.model.tig00021038.81 Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana DDB2 0.8313467601979034 76 Cpa|evm.model.tig00021464.55 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 54CP, SRP54CP, CPSRP54, FFC 0.8308190413841684 77 Cpa|evm.model.tig00001003.21 Enoyl-[acyl-carrier-protein] reductase, mitochondrial OS=Arabidopsis thaliana 0.8303399976093953 79 Cpa|evm.model.tig00020614.56 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 38.2) ATMKK6, ANQ1, MKK6 0.8297591007212655 88 Cpa|evm.model.tig00000361.3 0.8294883402453979 82 Cpa|evm.model.tig00000980.32 0.8287302385412423 94 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana 0.8280961495006558 99 Cpa|evm.model.tig00020952.42 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.8228062159676338 91 Cpa|evm.model.tig00000900.25 0.8204440293271005 93 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana AtABCC2, ABCC2, ATMRP2, EST4, MRP2 0.8193236122197365 95 Cpa|evm.model.tig00021432.42 0.8174022593616797 98