Sequence Description Alias PCC hrr Cpa|evm.model.tig00020562.25 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase 0.9415476119006175 1 Cpa|evm.model.tig00001181.31 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN carboxylase 0.9294775117577291 2 Cpa|evm.model.tig00000553.15 0.9270342063599372 3 Cpa|evm.model.tig00021168.21 RNA processing.RNA modification.rRNA/tRNA methylation.TRM1 tRNA guanosine-methyltransferase 0.9052126243751355 4 Cpa|evm.model.tig00000113.111 ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana FAS4, ATFAS4 0.8922818515590447 5 Cpa|evm.model.tig00020927.46 0.883672843895843 6 Cpa|evm.model.tig00020693.9 0.8818478442363221 8 Cpa|evm.model.tig00021525.7 0.8769997172453067 8 Cpa|evm.model.tig00021319.4 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.aspartate transcarbamoylase PYRB 0.8747312001326206 13 Cpa|evm.model.tig00001027.18 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO3/XPOT export karyopherin 0.8744567896472472 10 Cpa|evm.model.tig00000480.46 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana RUS1 0.8656036849137542 11 Cpa|evm.model.tig00000622.20 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.bifunctional 5-aminoimidazole-4-carboxamide RN transformylase and IMP cyclohydrolase 0.8618629702853842 12 Cpa|evm.model.tig00000405.63 Ammonium transporter 3 member 3 OS=Oryza sativa subsp. japonica 0.8559671845742666 13 Cpa|evm.model.tig00021348.37 DNA-directed RNA polymerase I subunit 2 OS=Arabidopsis thaliana NRPA2 0.8451581569690569 14 Cpa|evm.model.tig00020848.30 Stromal processing peptidase, chloroplastic OS=Pisum sativum 0.8381135118219507 26 Cpa|evm.model.tig00020830.37 Protein modification.lipidation.Glycophosphatidylinositol (GPI)-anchor addition.GPI transamidase complex.GAA1 component 0.8372871486347758 22 Cpa|evm.model.tig00000388.55 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 112.3) & Protein arginine N-methyltransferase 7 OS=Oryza sativa subsp. indica PRMT7, ATPRMT7 0.8319912239198991 17 Cpa|evm.model.tig00022075.42 ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana tabacum FTSH5, VAR1 0.8312882346492211 18 Cpa|evm.model.tig00020961.62 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component 0.8292465158883537 21 Cpa|evm.model.tig00021726.3 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana PTB3 0.8288079247276067 33 Cpa|evm.model.tig00000615.12 0.8267374693686244 23 Cpa|evm.model.tig00000734.7 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana UBP23 0.8239128670257564 22 Cpa|evm.model.tig00020553.142 0.8217224749902208 23 Cpa|evm.model.tig00021493.48 0.8199883084568134 24 Cpa|evm.model.tig00021721.26 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP12 assembly factor 0.8163673225754803 63 Cpa|evm.model.tig00020704.45 0.8154002721186192 40 Cpa|evm.model.tig00021312.7 0.8153410166828614 27 Cpa|evm.model.tig00021108.10 0.8152310529522101 28 Cpa|evm.model.tig00020603.86 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase 0.8122076262183902 29 Cpa|evm.model.tig00000711.70 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.phosphoribosyldiphosphate 5-amidotransferase ATASE1, ATASE, ASE1 0.8118329296420088 72 Cpa|evm.model.tig00021680.14 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.NST nucleotide sugar transporter 0.8103493277848489 31 Cpa|evm.model.tig00020825.12 0.809258644114366 32 Cpa|evm.model.tig00000821.31 0.8092448557777184 33 Cpa|evm.model.tig00020912.53 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP43 component 0.8081719912863266 34 Cpa|evm.model.tig00020710.44 0.8067220784181626 50 Cpa|evm.model.tig00001250.8 0.8063289731959248 49 Cpa|evm.model.tig00001278.11 RNA processing.RNA modification.rRNA/tRNA methylation.TRM8-TRM82 tRNA guanosine-methyltransferase complex.TRM82 component AtTRM82, TRM82 0.8052429449114988 45 Cpa|evm.model.tig00000114.21 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor OLI2 0.80462096634201 38 Cpa|evm.model.tig00021105.54 Lipid metabolism.glycerolipid synthesis.phosphatidylcholine.CDP-choline pathway.aminoalcohol phosphotransferase ATAAPT2, AAPT2 0.8036868476878923 62 Cpa|evm.model.tig00020537.71 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Clp1 component CLPS3 0.8021131336492184 71 Cpa|evm.model.tig00000806.13 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase PDR2, MIA 0.8011392357553236 57 Cpa|evm.model.tig00021680.29 0.8007444861626763 43 Cpa|evm.model.tig00000545.36 0.796918191841054 43 Cpa|evm.model.tig00021537.15 Ribose-phosphate pyrophosphokinase 1 OS=Spinacia oleracea 0.7966755740995887 45 Cpa|evm.model.tig00020943.85 DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica 0.7960756454058647 56 Cpa|evm.model.tig00020734.25 DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana PMH2, ATRH53 0.7934226029259004 46 Cpa|evm.model.tig00000144.74 Notchless protein homolog OS=Arabidopsis thaliana 0.7926029705141081 47 Cpa|evm.model.tig00000382.38 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component 0.7919448804100576 66 Cpa|evm.model.tig00000880.2 0.7897644053150654 49 Cpa|evm.model.tig00020629.91 0.7881794896892035 50 Cpa|evm.model.tig00020830.111 0.7880459279374215 51 Cpa|evm.model.tig00021464.39 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor LOS1 0.7854166746510376 52 Cpa|evm.model.tig00020965.56 Histone-lysine N-methyltransferase ASHR1 OS=Arabidopsis thaliana 0.7851887468967256 53 Cpa|evm.model.tig00020563.150 Adenylyltransferase and sulfurtransferase MOCS3-1 OS=Zea mays SIR1, CNX5 0.7848617070236045 54 Cpa|evm.model.tig00000836.14 0.7818215946156439 59 Cpa|evm.model.tig00000144.75 0.7805027270101935 68 Cpa|evm.model.tig00000057.87 ATFRO1, FRO1 0.7796433387703637 58 Cpa|evm.model.tig00000140.10 Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.7790398273954067 59 Cpa|evm.model.tig00000912.48 0.7770611361665609 60 Cpa|evm.model.tig00020562.10 0.777018420483993 61 Cpa|evm.model.tig00020684.42 0.77632831777602 62 Cpa|evm.model.tig00020801.14 0.7740898484985913 63 Cpa|evm.model.tig00000388.46 EDA7 0.7730730386104597 89 Cpa|evm.model.tig00000663.67 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP15 0.7730317327949514 66 Cpa|evm.model.tig00001024.37 Protein ILITYHIA OS=Arabidopsis thaliana 0.7714789938387318 67 Cpa|evm.model.tig00000388.58 Protein biosynthesis.organelle translation machineries.translation initiation.IF-1 initiation factor 0.7706036068054284 68 Cpa|evm.model.tig00000430.45 0.7666190090861913 87 Cpa|evm.model.tig00000600.11 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Snu13 component 0.7649901491566797 74 Cpa|evm.model.tig00020603.85 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase 0.7648593842686431 74 Cpa|evm.model.tig00020660.7 0.7647344034109751 75 Cpa|evm.model.tig00001065.32 0.7612888583571608 76 Cpa|evm.model.tig00021108.9 0.7603064879013874 92 Cpa|evm.model.tig00000113.69 0.7579304927263085 81 Cpa|evm.model.tig00021348.38 DNA-directed RNA polymerase I subunit 2 OS=Arabidopsis thaliana NRPA2 0.7568875970329029 82 Cpa|evm.model.tig00000404.33 Protein biosynthesis.organelle translation machineries.translation elongation.EF-P elongation factor 0.754273258234991 83 Cpa|evm.model.tig00020830.108 0.7542650163437076 84 Cpa|evm.model.tig00000507.15 0.753888597601667 85 Cpa|evm.model.tig00000057.88 0.7532606419190948 86 Cpa|evm.model.tig00000189.47 0.7493253649943479 89 Cpa|evm.model.tig00000571.5 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP2/NOP14 assembly factor 0.7473430331122257 91 Cpa|evm.model.tig00000056.32 0.7469309896236666 92 Cpa|evm.model.tig00000404.41 0.746871998694081 94 Cpa|evm.model.tig00000361.52 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component 0.7410514206860324 99 Cpa|evm.model.tig00020830.107 0.7402647166097719 100