Sequence Description Alias PCC hrr Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9482561923616728 6 Cpa|evm.model.tig00000912.18 PFD6 0.946760051812421 2 Cpa|evm.model.tig00020685.15 0.9399142031943214 3 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase NRS/ER, UER1 0.9388200841700571 11 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit 0.926886114140661 5 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase MPK6, ATMAPK6, ATMPK6, MAPK6 0.9229000099906104 8 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GME 0.9199339822942831 12 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.916665235848061 12 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase IPP1 0.9150453751070086 10 Cpa|evm.model.tig00020553.154 0.9147970372795335 15 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit 0.9137715136044667 11 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component ATSUG1, RPT6A 0.9122994275968476 23 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase 0.9109165482180025 13 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris ACAM-6, CAM6 0.9107603909728276 14 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit HAP13 0.9106664065836819 15 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.9094141788579326 23 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.9086073531773227 19 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.9083507637149255 34 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.9083252097396729 25 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1 0.9067305051676368 57 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component emb1220 0.9066622784904125 37 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component MEE34 0.9051037674777741 30 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase AtRABH1e, RABH1e 0.9009576997670429 37 Cpa|evm.model.tig00000704.46 Cilia- and flagella-associated protein 52 OS=Chlamydomonas reinhardtii 0.8997747793203759 49 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.8992874216878765 43 Cpa|evm.model.tig00021464.27 0.89844547787204 30 Cpa|evm.model.tig00021612.44 0.8966695587512905 44 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1 0.8965822636463099 39 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase HAM1 0.8957099286293129 29 Cpa|evm.model.tig00001408.10 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase RAB1C, ATRAB1C, ATRABD2C 0.8955235629149912 30 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component PFD3 0.8950780377392903 31 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana 0.8949449966965672 32 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein AGD8 0.8941302415279905 35 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana RPT3 0.8939909708501849 35 Cpa|evm.model.tig00021589.1 0.8923346162741087 58 Cpa|evm.model.tig00021319.35 0.8921218674109692 45 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component ATARP2, ARP2, WRM 0.8919623123732846 89 Cpa|evm.model.tig00000912.8 Dynein assembly factor 3, axonemal homolog OS=Chlamydomonas reinhardtii 0.8909627420535158 68 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana SGP1, ATSGP1 0.8908913492452166 39 Cpa|evm.model.tig00020675.94 0.8907556832690451 40 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana 0.8899672100973024 41 Cpa|evm.model.tig00001107.5 0.8873172472984521 82 Cpa|evm.model.tig00000704.70 Intraflagellar transport protein 81 OS=Chlamydomonas reinhardtii 0.8873007185403314 52 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana 0.884834577957092 44 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana PAB1 0.8838605925980217 45 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein SIRANBP 0.882698979752432 46 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase ERG9, SQS1 0.8823881962056364 57 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component ATS9, RPN6 0.8815330667873581 48 Cpa|evm.model.tig00000912.17 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component ATO 0.8812792853572591 49 Cpa|evm.model.tig00020848.76 0.8810279454199487 54 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone 0.8807627620971608 51 Cpa|evm.model.tig00000829.24 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component 0.8800093465956672 52 Cpa|evm.model.tig00000944.19 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-F component 0.8791131025194647 53 Cpa|evm.model.tig00021348.94 0.8786974466429132 87 Cpa|evm.model.tig00000203.31 0.8773436255835277 55 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein ATSEC22, SEC22 0.8758019160514101 56 Cpa|evm.model.tig00000076.91 0.8755174886710915 85 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) 0.8746015110035414 59 Cpa|evm.model.tig00000704.48 Cell cycle.interphase.DNA replication.elongation.DNA-tracking platform.PCNA sliding clamp loader complex.RFC3 component EMB251, RFC3, EMB161, EMB2775 0.8738820636855105 65 Cpa|evm.model.tig00001030.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 263.1) & Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica ATCPK12, CDPK9, ATCDPK9, CPK12 0.8734475926029708 61 Cpa|evm.model.tig00001107.25 0.8726476813792796 62 Cpa|evm.model.tig00021612.51 0.8726130210310756 63 Cpa|evm.model.tig00001049.12 0.8720765469562657 79 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8718938189788443 66 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana 0.8715493158506096 67 Cpa|evm.model.tig00001229.13 0.8710908487486301 85 Cpa|evm.model.tig00020684.43 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud31 component 0.8704702057741284 69 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component 0.8697496478563331 70 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component PBF1 0.8693690589933911 72 Cpa|evm.model.tig00021612.39 0.868535648390575 73 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica RPT5A, ATS6A.2 0.8684421290071945 74 Cpa|evm.model.tig00000042.179 Intraflagellar transport protein 56 OS=Chlamydomonas reinhardtii 0.8677623959238399 75 Cpa|evm.model.tig00020918.9 0.8677439930155415 95 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component RPT1A 0.8673877852591187 77 Cpa|evm.model.tig00021319.61 0.8671785799096576 78 Cpa|evm.model.tig00000411.74 0.8666436237747914 79 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase LOS4 0.8665772765984217 80 Cpa|evm.model.tig00021464.17 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana ATRHM2, RHM2, ATMUM4, MUM4 0.8663342557461361 81 Cpa|evm.model.tig00001073.12 13 kDa deflagellation-inducible protein OS=Chlamydomonas reinhardtii 0.8655319015850433 83 Cpa|evm.model.tig00000821.8 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-delta regulator protein 0.8649281745124197 85 Cpa|evm.model.tig00021464.30 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) AtMAPR2, MAPR2 0.8648927560581086 86 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component MUS81, ATMUS81 0.8644095944277776 87 Cpa|evm.model.tig00020553.160 0.8640193287056124 88 Cpa|evm.model.tig00000042.6 0.8636179733416883 89 Cpa|evm.model.tig00001001.10 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-A cofactor 0.8634662060967819 90 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase UCH2 0.8633795780986113 91 Cpa|evm.model.tig00000042.105 0.8633099450956269 92 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana PGK 0.8632611753254293 93 Cpa|evm.model.tig00001428.10 0.8629285988112295 94 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana NF-YB3 0.8628844040879964 95 Cpa|evm.model.tig00021127.124 0.8625443069543689 96 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component RFC3, RFC5 0.8622859272650433 97 Cpa|evm.model.tig00022075.35 0.8621800081928811 98 Cpa|evm.model.tig00000310.74 0.8613455912706554 99 Cpa|evm.model.tig00020531.30 0.861259369382881 100