Sequence Description Alias PCC hrr Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) AXL 0.9356080665933906 2 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.9349709166328698 5 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor ERD2B 0.9311096376606974 3 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana SMU1 0.9234222061300744 27 Cpa|evm.model.tig00021123.42 0.9203569904432399 6 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.9183841498695754 6 Cpa|evm.model.tig00000789.42 0.9172828419860305 7 Cpa|evm.model.tig00001206.10 Peptide chain release factor APG3, chloroplastic OS=Arabidopsis thaliana APG3 0.9135245343224515 11 Cpa|evm.model.tig00020554.114 0.9134121854396877 9 Cpa|evm.model.tig00020553.162 N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana 0.9112186412806699 10 Cpa|evm.model.tig00021589.1 0.9107328485895385 27 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.9084408590461307 33 Cpa|evm.model.tig00021612.44 0.9053426424082294 32 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.9051364215418514 41 Cpa|evm.model.tig00000704.21 COMPASS-like H3K4 histone methylase component WDR5B OS=Arabidopsis thaliana 0.9048114128710586 32 Cpa|evm.model.tig00000704.40 0.9037634875035511 29 Cpa|evm.model.tig00000203.14 0.9035653306597745 19 Cpa|evm.model.tig00001372.8 0.9027491845675321 18 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component ATEIF3G1, EIF3G1 0.9022312659367702 19 Cpa|evm.model.tig00021123.23 0.9021227641259092 20 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase ERG9, SQS1 0.9016207745765386 23 Cpa|evm.model.tig00020918.9 0.901093813426539 26 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.9002535831065213 53 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana GLYR1, GHBDH, GR1, ATGHBDH 0.8997578670311698 24 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase NRS/ER, UER1 0.8987555803228849 69 Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.8987540020254958 35 Cpa|evm.model.tig00000704.63 0.8974055375631195 27 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component ATCBP80, ABH1, ENS, CBP80 0.8971594743303873 28 Cpa|evm.model.tig00020554.15 0.8971547847905088 29 Cpa|evm.model.tig00020554.139 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.TANMEI checkpoint protein 0.8957358356332421 34 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.8939828966829653 63 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase 0.8938494088082424 32 Cpa|evm.model.tig00000383.35 tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp. japonica ESR, ESP, TASTY 0.8936255088671338 33 Cpa|evm.model.tig00000076.86 0.8933895787678137 34 Cpa|evm.model.tig00000704.49 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 11 NRPE11, NRPD11, ATRPB13.6, NRPB11 0.8886140337404012 35 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana UVR1, UVH3 0.8879946320465044 36 Cpa|evm.model.tig00000704.59 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor 0.8864042955691573 37 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana PPX1, PPX-1 0.8850461110668347 38 Cpa|evm.model.tig00021357.26 0.883591486687792 54 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1 0.881967453159315 69 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.8817578243070638 41 Cpa|evm.model.tig00000704.66 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8790991997779041 42 Cpa|evm.model.tig00000194.28 N-alpha-acetyltransferase MAK3 OS=Arabidopsis thaliana ATMAK3 0.8786734780624826 43 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.8778330521361102 44 Cpa|evm.model.tig00000383.37 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia ATU2AF65A 0.8776576226651382 45 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor 0.8766529123357827 46 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein AGD8 0.8762103751896136 61 Cpa|evm.model.tig00001424.4 0.8758706417373947 58 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein ATG3, ATATG3 0.8752875775017095 54 Cpa|evm.model.tig00001229.15 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) 0.8750138074217523 50 Cpa|evm.model.tig00000829.20 Protein degradation.ER-associated protein degradation (ERAD) machinery.DFM1 component DER2.2 0.8749472397784478 51 Cpa|evm.model.tig00000350.27 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit 0.8748822469924616 53 Cpa|evm.model.tig00000704.30 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 3 NRPB3, RPB35.5A, RBP36A, NRPD3, NRPE3A 0.8742618483918598 67 Cpa|evm.model.tig00001038.20 0.8739941143729787 54 Cpa|evm.model.tig00021350.40 0.8723023542000193 56 Cpa|evm.model.tig00000912.6 Protein translocation.peroxisome.importomer translocation system.cargo-receptor system.Pex5 component PEX5, ATPEX5 0.8722842228739148 57 Cpa|evm.model.tig00021502.1 0.8720576688665198 58 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter 0.8718736178428954 59 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component SK20, ASK20 0.8715458718605215 68 Cpa|evm.model.tig00020903.16 0.8712685346098751 61 Cpa|evm.model.tig00020553.139 0.8712087334764347 62 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase LOS4 0.8706726123518331 63 Cpa|evm.model.tig00000478.39 0.8705844801729286 64 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.8700975934714377 65 Cpa|evm.model.tig00021319.34 0.8700377837190993 66 Cpa|evm.model.tig00000912.29 0.869811873648269 67 Cpa|evm.model.tig00000789.45 0.8697465208693347 68 Cpa|evm.model.tig00021464.57 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein AGD6 0.8692427925111765 69 Cpa|evm.model.tig00000615.62 0.8686009979094215 70 Cpa|evm.model.tig00000037.37 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate dehydratase 0.8685989905381337 71 Cpa|evm.model.tig00001049.17 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (DCN1) 0.8681076066848935 72 Cpa|evm.model.tig00021357.16 0.8679421656266528 73 Cpa|evm.model.tig00021357.6 0.8679388327026873 74 Cpa|evm.model.tig00000704.27 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component 0.8676626222280794 75 Cpa|evm.model.tig00020531.49 0.867348279831852 76 Cpa|evm.model.tig00000076.104 0.8661746689094003 77 Cpa|evm.model.tig00000829.12 0.8659383469398669 78 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter 0.8652046646762966 79 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.8647016166141809 80 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8643919515215283 82 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component ATGCP4, GCP4 0.8641047103446748 83 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.8636054351591861 84 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 RPB15.9, RPB15.9.9, NRPB4, ATRPB15.9 0.8631960020762103 85 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana SMP2 0.8627922456819023 86 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.8627774430316262 87 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana 0.8622392221627304 88 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein ACT11 0.8619216334537816 89 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8618341303670461 90 Cpa|evm.model.tig00021502.2 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP26, SUP32, ATUBP26 0.8603336932343943 91 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana UBP6, ATUBP6 0.8600465625882481 92 Cpa|evm.model.tig00001234.12 0.859880187998126 93 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component RFC3, RFC5 0.8598356413328577 94 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.859537302440906 95 Cpa|evm.model.tig00000203.33 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL15 component 0.859297169714095 96 Cpa|evm.model.tig00001333.27 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component U1-70K, U1SNRNP 0.8587099477436507 97 Cpa|evm.model.tig00000404.29 0.858707852718688 98 Cpa|evm.model.tig00000037.2 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate aminotransferase HISN6B 0.856967167669772 100