Sequence Description Alias PCC hrr Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana 0.9410809819475247 1 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component 0.9378675215797923 9 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit 0.928349609562076 13 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.9267242483933675 9 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana RPT3 0.9240793689023016 7 Cpa|evm.model.tig00000842.8 0.923774201056142 6 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component PAA2 0.9232068952727674 7 Cpa|evm.model.tig00021352.5 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component Y14 0.9213168469261085 8 Cpa|evm.model.tig00020554.157 Ubiquitin carboxyl-terminal hydrolase 6 OS=Arabidopsis thaliana UBP6, ATUBP6 0.9170651899679022 9 Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component 0.913639282900991 16 Cpa|evm.model.tig00000478.39 0.9133206326756291 11 Cpa|evm.model.tig00000792.28 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component ATSUG1, RPT6A 0.9132259763911657 21 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component RPN10, MCB1, ATMCB1, MBP1 0.9114953921672986 20 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein AGD8 0.9079883067265009 21 Cpa|evm.model.tig00020553.139 0.9071768323031519 15 Cpa|evm.model.tig00000863.11 Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica AT;CDCKD;3, CDKD1;3, CAK2AT 0.9045947125550922 16 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana PAB1 0.9033390833460614 21 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase UCH2 0.9029599660904919 18 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component 0.9013400736271976 19 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica 0.8980215025365174 20 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component 0.8976083994530191 28 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.8959109123146494 48 Cpa|evm.model.tig00000241.37 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 4 RPB15.9, RPB15.9.9, NRPB4, ATRPB15.9 0.8943013347909551 23 Cpa|evm.model.tig00000704.63 0.8912724416432407 24 Cpa|evm.model.tig00021127.124 0.8910403574516574 25 Cpa|evm.model.tig00001093.6 Synaptotagmin-5 OS=Arabidopsis thaliana SYT5, NTMC2T2.1, SYTE, NTMC2TYPE2.1, ATSYTE 0.8904863928398224 26 Cpa|evm.model.tig00021348.94 0.8902476140748429 60 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana 0.88971734486786 28 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) 0.8889067436416483 29 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana NF-YB3 0.8886634377253342 30 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.8879490794529595 69 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase ATSPP, SPP 0.8870695211611221 34 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase HAL, ATARLC1, ARL2, TTN5 0.8864610980444155 33 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein ATG3, ATATG3 0.8852360643965025 36 Cpa|evm.model.tig00000319.31 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.CGI121 component 0.8838380725629219 36 Cpa|evm.model.tig00001038.20 0.8833194249229487 37 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit 0.8827211001628812 38 Cpa|evm.model.tig00001600.14 0.8822480122354768 39 Cpa|evm.model.tig00001229.15 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) 0.881983794888607 40 Cpa|evm.model.tig00001107.11 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase ERG9, SQS1 0.8819527641195521 58 Cpa|evm.model.tig00021612.44 0.8818837490319607 73 Cpa|evm.model.tig00000217.21 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 175.7) & Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana ARS5, PAF1, ATPSM30 0.8812612723344171 43 Cpa|evm.model.tig00020538.10 Calmodulin OS=Helianthus annuus ACAM-6, CAM6 0.8807944195439824 44 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein 0.8799282727134239 45 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.8787025277037277 46 Cpa|evm.model.tig00001049.12 0.8777064983563642 65 Cpa|evm.model.tig00001130.30 Intraflagellar transport protein 43 OS=Chlamydomonas reinhardtii 0.8776936318170201 48 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component 0.8766669049703194 82 Cpa|evm.model.tig00021464.27 0.8764475880920524 75 Cpa|evm.model.tig00000829.13 0.8745754339476816 51 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component PBG1 0.8743471779320875 52 Cpa|evm.model.tig00000203.22 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate reductase 0.8743359784793593 53 Cpa|evm.model.tig00021351.15 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component Y14 0.8728101308691975 54 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica RPT5A, ATS6A.2 0.8716718415503449 55 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase ACD, ALATS 0.8708768376186203 56 Cpa|evm.model.tig00001590.11 0.8703275797874811 57 Cpa|evm.model.tig00020629.95 Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana UBC13A, UBC35 0.8701904754530577 58 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer AHP1 0.8693690589933911 72 Cpa|evm.model.tig00000128.3 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component 0.8679737339756731 60 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component RPN5B 0.8675022836405754 61 Cpa|evm.model.tig00020848.28 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 170.4) & Probable nucleoside diphosphate kinase 5 OS=Arabidopsis thaliana 0.8668653800157818 63 Cpa|evm.model.tig00001299.14 0.8666605590377193 64 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana PPX1, PPX-1 0.8665899833882703 65 Cpa|evm.model.tig00000342.28 0.8664972264751213 66 Cpa|evm.model.tig00020554.114 0.8664803588837225 67 Cpa|evm.model.tig00000525.12 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus TOPP7 0.866129347704421 68 Cpa|evm.model.tig00020553.157 Protein BTR1 OS=Arabidopsis thaliana 0.8643027957327194 70 Cpa|evm.model.tig00021290.10 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.MAD2 checkpoint protein MAD2 0.8641068353333758 70 Cpa|evm.model.tig00000692.64 Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica ATPAE1, PAE1 0.8635256510054957 71 Cpa|evm.model.tig00000404.30 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP19 component 0.8630102366114635 72 Cpa|evm.model.tig00000955.23 0.8623273072842931 74 Cpa|evm.model.tig00021326.40 0.8604556897099025 76 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component ATTIP49A, RIN1 0.8598189585720961 88 Cpa|evm.model.tig00020554.44 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component 0.8596518976695 78 Cpa|evm.model.tig00020537.64 TTL 0.8594003499308558 79 Cpa|evm.model.tig00021123.42 0.8589228262707067 98 Cpa|evm.model.tig00021234.15 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component 0.8588182739373095 81 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase IPP1 0.8587579454318648 88 Cpa|evm.model.tig00000076.86 0.8583468952711385 83 Cpa|evm.model.tig00000383.54 Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.8583226076022529 84 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component PFD3 0.8581455354955285 90 Cpa|evm.model.tig00001428.10 0.8577817667173686 86 Cpa|evm.model.tig00021464.58 0.857410016688052 87 Cpa|evm.model.tig00020703.10 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component RPN1A, ATRPN1A 0.856544052064382 88 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica 0.8560819570414471 89 Cpa|evm.model.tig00021357.3 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN8 component 0.8549177931750457 90 Cpa|evm.model.tig00021433.15 0.8535866998218914 93 Cpa|evm.model.tig00000237.8 0.8532994778862832 94 Cpa|evm.model.tig00021348.85 0.8531473529869382 95 Cpa|evm.model.tig00000480.60 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm4 component emb1644 0.8531006742785059 96 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component RPN12a 0.852597401701725 97 Cpa|evm.model.tig00020961.48 0.8524998837168908 98 Cpa|evm.model.tig00000194.40 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component 0.8519164589686486 99 Cpa|evm.model.tig00020965.24 0.851825838186236 100