Sequence Description Alias PCC hrr Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor APE1 0.944092118908082 1 Cpa|evm.model.tig00020556.13 0.9375921715943767 5 Cpa|evm.model.tig00000507.13 0.9294444747851209 3 Cpa|evm.model.tig00000900.16 Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana 0.9230528881663274 4 Cpa|evm.model.tig00001269.6 0.9211282180881307 5 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.9181934622288384 7 Cpa|evm.model.tig00020554.98 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M24 methionyl aminopeptidase (MAP1) MAP1D 0.9179290713732587 7 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana 0.907821607262772 9 Cpa|evm.model.tig00000980.32 0.899875735858662 9 Cpa|evm.model.tig00000492.83 0.8956150770236698 70 Cpa|evm.model.tig00000378.18 0.8935625101851723 75 Cpa|evm.model.tig00021127.131 0.8929717593418669 79 Cpa|evm.model.tig00020938.9 Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic OS=Arabidopsis thaliana 0.8923744257350159 81 Cpa|evm.model.tig00021254.26 0.8917027523401754 57 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana 0.8908296937561553 88 Cpa|evm.model.tig00000863.53 0.8887007988000558 36 Cpa|evm.model.tig00000796.24 0.8884314173055955 54 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana 0.888078046966967 94 Cpa|evm.model.tig00021035.15 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8864986720574314 19 Cpa|evm.model.tig00020556.38 0.8861782847140125 89 Cpa|evm.model.tig00020961.55 0.8855340743368998 21 Cpa|evm.model.tig00021434.72 0.8851590804549692 22 Cpa|evm.model.tig00021464.19 0.8820938441868345 59 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar ATCCD1, CCD1, NCED1, ATNCED1 0.8806836487142612 87 Cpa|evm.model.tig00021127.121 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic OS=Arabidopsis thaliana FTSH5, VAR1 0.8805778574339042 25 Cpa|evm.model.tig00020934.55 0.8797228821216838 41 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana 0.8792618194284096 89 Cpa|evm.model.tig00001215.19 0.878100969734793 89 Cpa|evm.model.tig00021616.13 0.8779230655028666 90 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8756759846866368 84 Cpa|evm.model.tig00021493.51 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana 0.8751041059048528 37 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor 0.8743206803849485 33 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum 0.8736775159044352 79 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8731580027087624 36 Cpa|evm.model.tig00000640.27 0.8718270410032611 36 Cpa|evm.model.tig00021357.42 0.870045262485207 39 Cpa|evm.model.tig00000863.47 Embryogenesis-associated protein EMB8 OS=Picea glauca 0.8695536986025912 43 Cpa|evm.model.tig00000361.30 Probable histidine kinase 3 OS=Oryza sativa subsp. indica ETR, ETR1, EIN1, AtETR1 0.8678164499685064 47 Cpa|evm.model.tig00020554.156 0.8665087791750716 48 Cpa|evm.model.tig00001095.9 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana CRTISO, CCR2 0.8660053969214033 49 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana ATMRP12, MRP12, ABCC11 0.8657893214082159 91 Cpa|evm.model.tig00020941.39 0.8647130429396419 97 Cpa|evm.model.tig00000079.6 0.862190825149855 91 Cpa|evm.model.tig00000403.60 0.8611831286528233 57 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8595689362370379 93 Cpa|evm.model.tig00021517.29 0.8587872151312876 77 Cpa|evm.model.tig00000317.11 0.8575258844454214 62 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana RUS1 0.8574193860420285 75 Cpa|evm.model.tig00000893.6 0.8562423854333185 64 Cpa|evm.model.tig00000769.1 ABC transporter C family member 2 OS=Arabidopsis thaliana AtABCC2, ABCC2, ATMRP2, EST4, MRP2 0.8560453227211164 65 Cpa|evm.model.tig00001065.21 0.8556551361967706 66 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana ETR, ETR1, EIN1, AtETR1 0.8551644218292243 67 Cpa|evm.model.tig00000760.8 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH10, ATABC1, ABC1 0.8545581035127442 88 Cpa|evm.model.tig00021517.16 0.8543211569802518 70 Cpa|evm.model.tig00021616.12 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.monodehydroascorbate reductase (MDAR) MDAR6 0.8542632183574403 89 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.8542610612933409 72 Cpa|evm.model.tig00001629.4 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.Z-ISO zeta-carotene isomerase Z-ISO1.1, Z-ISO, Z-ISO1.2 0.8542014231366569 91 Cpa|evm.model.tig00000622.21 Protein TAB2 homolog, chloroplastic OS=Zea mays 0.8533057416092865 75 Cpa|evm.model.tig00000254.128 0.8530817153332185 96 Cpa|evm.model.tig00020961.12 0.8513542800647327 83 Cpa|evm.model.tig00021616.18 0.8498161848818081 88 Cpa|evm.model.tig00000254.123 0.8486870681877419 90 Cpa|evm.model.tig00021517.27 0.8482480518685968 91 Cpa|evm.model.tig00000042.76 Protein modification.S-glutathionylation and deglutathionylation.glutaredoxin 0.8479094121260696 92 Cpa|evm.model.tig00020952.7 ABC transporter B family member 2 OS=Arabidopsis thaliana PGP2 0.847068951530976 94 Cpa|evm.model.tig00000949.8 0.846766557412989 97 Cpa|evm.model.tig00001415.10 0.84618997036829 99