Sequence Description Alias PCC hrr Cpa|evm.model.tig00001206.15 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF1/MAC9 component 0.9469314988792025 3 Cpa|evm.model.tig00001424.4 0.9452312505605492 2 Cpa|evm.model.tig00000217.28 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.A-type scaffold component PR 65, PP2AA2, PDF1 0.9440392798650521 4 Cpa|evm.model.tig00000842.4 Phosphoinositide phosphatase SAC6 OS=Arabidopsis thaliana 0.9437741835458118 4 Cpa|evm.model.tig00000704.40 0.9413863155148332 5 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase UCH2 0.9298607710177077 6 Cpa|evm.model.tig00020553.139 0.9250028134751809 7 Cpa|evm.model.tig00000197.16 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component SK20, ASK20 0.9230892694819919 10 Cpa|evm.model.tig00000319.25 Cytoskeleton.microfilament network.actin filament protein ACT11 0.9217582282919249 9 Cpa|evm.model.tig00000383.39 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor HVE, TIP120, CAND1, ATCAND1, ETA2 0.9215405052306296 10 Cpa|evm.model.tig00020909.31 Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana 0.9160066478564424 11 Cpa|evm.model.tig00001333.27 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1-70K snRNP component U1-70K, U1SNRNP 0.9135264770537043 12 Cpa|evm.model.tig00020553.156 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit 0.9128389506939107 14 Cpa|evm.model.tig00000944.34 CID4 0.9124784198818146 14 Cpa|evm.model.tig00020554.138 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.911967102291916 15 Cpa|evm.model.tig00000829.5 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase ATHDA15, HDA15 0.9109650332227401 16 Cpa|evm.model.tig00021319.66 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC3/Tex1 component THO3, TEX1, AtTEX1 0.9091626647821551 35 Cpa|evm.model.tig00020903.14 Protein degradation.peptidase families.cysteine-type peptidase activities.UFM1-specific protease 0.9078712005693477 23 Cpa|evm.model.tig00000478.39 0.9050478486602115 19 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana RPAC43, ATRPAC43 0.902800647262312 20 Cpa|evm.model.tig00000241.177 0.9026424846606673 21 Cpa|evm.model.tig00020930.28 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica 0.9003973322870782 22 Cpa|evm.model.tig00021589.24 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component ATCBP80, ABH1, ENS, CBP80 0.8997826432798665 23 Cpa|evm.model.tig00000319.24 0.8984604318928171 24 Cpa|evm.model.tig00021123.23 0.8978259222274202 25 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana RPT3 0.8951615524098286 34 Cpa|evm.model.tig00000836.8 Chromatin organisation.chromatin remodeling complexes.RVB helicase component ATTIP49A, RIN1 0.892892293428027 27 Cpa|evm.model.tig00000789.42 0.8917574291665796 28 Cpa|evm.model.tig00001333.33 0.8894833178644977 29 Cpa|evm.model.tig00000789.44 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin NUP155 0.8869443902768404 31 Cpa|evm.model.tig00000955.23 0.8830488431426776 32 Cpa|evm.model.tig00022075.51 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).GCP4 component ATGCP4, GCP4 0.8821323027908786 33 Cpa|evm.model.tig00020554.143 0.8817168544692354 34 Cpa|evm.model.tig00000704.36 Protein HEAT INTOLERANT 4 OS=Arabidopsis thaliana 0.881209940667023 35 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component 0.8805038754046832 39 Cpa|evm.model.tig00000144.166 Actin-related protein 5 OS=Arabidopsis thaliana ARP5, ATARP5 0.880285462955549 84 Cpa|evm.model.tig00021352.45 Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component 0.878913682072769 38 Cpa|evm.model.tig00020918.9 0.8786194720743076 70 Cpa|evm.model.tig00001107.4 Deoxyhypusine synthase OS=Senecio vernalis DHS, EDA22 0.8785936555350096 47 Cpa|evm.model.tig00000808.7 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter CLT2 0.878294428803422 41 Cpa|evm.model.tig00000912.28 Probable protein S-acyltransferase 23 OS=Arabidopsis thaliana TIP1 0.8782053383724336 83 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana 0.8780740508877714 83 Cpa|evm.model.tig00000194.23 0.8778330521361102 44 Cpa|evm.model.tig00000704.42 0.8775894937574994 45 Cpa|evm.model.tig00000402.8 0.8769692150592913 47 Cpa|evm.model.tig00000912.29 0.8745993774121769 49 Cpa|evm.model.tig00020903.16 0.8744698218288175 50 Cpa|evm.model.tig00020961.48 0.8742003226174363 52 Cpa|evm.model.tig00021433.15 0.872913099314897 53 Cpa|evm.model.tig00001038.20 0.8726974652454743 54 Cpa|evm.model.tig00021612.44 0.8722171281797165 93 Cpa|evm.model.tig00001049.13 0.8716453856291531 59 Cpa|evm.model.tig00000194.52 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component TAF15 0.8712332353283788 57 Cpa|evm.model.tig00021612.50 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component 0.8705576910030508 58 Cpa|evm.model.tig00000704.58 Lipid metabolism.glycerolipid synthesis.phosphatidylglycerol.CDP-diacylglycerol synthase ATCDS1, CDS1 0.8705430961456636 59 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana PPX1, PPX-1 0.8695094525449739 60 Cpa|evm.model.tig00020703.9 26S proteasome non-ATPase regulatory subunit 2 homolog A OS=Arabidopsis thaliana 0.867662496676242 61 Cpa|evm.model.tig00000144.174 Glyoxylate/succinic semialdehyde reductase 2, chloroplastic OS=Arabidopsis thaliana GLYR1, GHBDH, GR1, ATGHBDH 0.8675699247441976 62 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein UBC32 0.8660324377135238 63 Cpa|evm.model.tig00001029.10 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.adenylosuccinate synthase ADSS 0.865686393342803 64 Cpa|evm.model.tig00000829.11 Transmembrane 9 superfamily member 7 OS=Arabidopsis thaliana AtTMN7, TMN7 0.8655479216062432 65 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein ATG3, ATATG3 0.8654615187601022 87 Cpa|evm.model.tig00020703.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase ACD, ALATS 0.8647530933438339 68 Cpa|evm.model.tig00020610.73 0.8644814563262488 69 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component PBF1 0.8643027957327194 70 Cpa|evm.model.tig00000829.3 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component CEF 0.8642026892254477 71 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana 0.8634231246127522 74 Cpa|evm.model.tig00000444.11 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIa basal transcription factor complex.small subunit 0.8632837359180007 75 Cpa|evm.model.tig00020538.14 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.PCID2/Thp1 component EER5 0.862864535960899 76 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component 0.8628241295141381 97 Cpa|evm.model.tig00001206.17 0.8624574274758244 78 Cpa|evm.model.tig00000194.48 Solute transport.carrier-mediated transport.MOP superfamily.RFT lipid-linked oligosaccharide transporter 0.8620014495797245 80 Cpa|evm.model.tig00001003.36 Ribosome production factor 2 homolog OS=Arabidopsis thaliana 0.8618175340176798 81 Cpa|evm.model.tig00000350.30 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8618092932443078 83 Cpa|evm.model.tig00020684.37 Protein modification.N-linked glycosylation.dolichol-phosphate-linked oligosaccharide precursor assembly.ALG6 alpha-1,3-glucosyltransferase 0.8616093587500848 83 Cpa|evm.model.tig00021319.38 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase ATSPP, SPP 0.8607329387609096 84 Cpa|evm.model.tig00000842.8 0.8601385837040211 85 Cpa|evm.model.tig00021181.11 0.8599022625502524 86 Cpa|evm.model.tig00000057.98 0.859684878832547 88 Cpa|evm.model.tig00000157.110 Cullin-4 OS=Arabidopsis thaliana ATCUL4, CUL4 0.8595967016759167 89 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component RFC3, RFC5 0.8593578827558953 90 Cpa|evm.model.tig00001372.8 0.8585975709792105 91 Cpa|evm.model.tig00021680.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN4 component FUS8, EMB134, CSN4, COP8, COP14, ATS4, FUS4 0.8585621230420187 92 Cpa|evm.model.tig00020909.37 Protein modification.phosphorylation.NEK kinase NEK3, ATNEK3 0.8577745639847976 95 Cpa|evm.model.tig00020903.26 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 37.8) 0.8577516310806771 96 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica 0.8566997351754355 97 Cpa|evm.model.tig00000498.60 0.8553967232670715 99 Cpa|evm.model.tig00001234.12 0.8546111667463696 100