Sequence Description Alias PCC hrr Cpa|evm.model.tig00001154.4 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.8966264807587739 1 Cpa|evm.model.tig00001229.4 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component AtHPR1, AtTHO1, THO1, HPR1 0.8915185294303357 5 Cpa|evm.model.tig00021234.33 0.8823577382118252 3 Cpa|evm.model.tig00020830.127 0.8764600357633001 4 Cpa|evm.model.tig00021127.94 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.ArpC2 component 0.8707501084040314 5 Cpa|evm.model.tig00021582.13 RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS6/CFIm68 component 0.8687998447198353 6 Cpa|evm.model.tig00000113.33 0.8633306705352675 11 Cpa|evm.model.tig00000981.30 0.8613936675361469 8 Cpa|evm.model.tig00001486.8 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone GTB1 0.8556025953627885 14 Cpa|evm.model.tig00020685.37 Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia peniculus TOPP2, PPO 0.8551951143010477 10 Cpa|evm.model.tig00001408.15 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component 0.8533351150795073 11 Cpa|evm.model.tig00021326.23 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF60 component 0.8517094920781667 12 Cpa|evm.model.tig00000241.25 0.8508909852010934 21 Cpa|evm.model.tig00020816.68 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP62 nucleoporin 0.8508547114590038 14 Cpa|evm.model.tig00021357.33 Chloride channel protein CLC-d OS=Arabidopsis thaliana CLC-D, ATCLC-D 0.8502487820803973 20 Cpa|evm.model.tig00021014.9 0.8502205669077164 16 Cpa|evm.model.tig00000217.38 0.8456783101214806 27 Cpa|evm.model.tig00001155.11 0.8455404083631682 18 Cpa|evm.model.tig00021518.3 0.8429753242882677 35 Cpa|evm.model.tig00020952.48 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8391704045209067 29 Cpa|evm.model.tig00021127.55 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase AMSH2 0.8388398546268488 21 Cpa|evm.model.tig00000430.21 0.8371025164814142 52 Cpa|evm.model.tig00000269.111 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana 0.8355580382575497 27 Cpa|evm.model.tig00001366.1 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.MET DNA methyltransferase DDM2, MET1, DMT01, MET2, DMT1, METI 0.835529486383353 24 Cpa|evm.model.tig00021038.99 E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica 0.8341316687931616 25 Cpa|evm.model.tig00021070.66 Kinesin-like protein KIN-4C OS=Arabidopsis thaliana 0.8317977406943847 26 Cpa|evm.model.tig00001214.5 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.SERRATE component 0.831137980818811 27 Cpa|evm.model.tig00001130.27 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.8308238196515537 39 Cpa|evm.model.tig00021742.22 0.8292889970219408 29 Cpa|evm.model.tig00021434.18 ABC transporter B family member 14 OS=Arabidopsis thaliana ATTAP1, TAP1 0.8287365295064054 30 Cpa|evm.model.tig00021493.5 Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica MAC3B 0.8282911739635239 35 Cpa|evm.model.tig00020961.105 0.8282155384389919 50 Cpa|evm.model.tig00000076.102 0.828079951612628 33 Cpa|evm.model.tig00000037.38 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component ALA3 0.8252020045844994 34 Cpa|evm.model.tig00021290.5 0.8251399526424773 35 Cpa|evm.model.tig00000350.9 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana PKR2 0.8235636219080329 36 Cpa|evm.model.tig00021489.10 0.8225319596404204 62 Cpa|evm.model.tig00001094.28 Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG1 component 0.820620506855502 38 Cpa|evm.model.tig00000342.20 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component 0.8198291978889019 42 Cpa|evm.model.tig00000448.28 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALIS regulatory component 0.8197358386017525 40 Cpa|evm.model.tig00020538.11 Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana 0.8178519526982311 41 Cpa|evm.model.tig00021462.11 0.8178409393458635 42 Cpa|evm.model.tig00021493.16 MOS7 0.8171798386603195 43 Cpa|evm.model.tig00021721.12 0.8170924581503662 55 Cpa|evm.model.tig00001086.23 0.816772096559736 45 Cpa|evm.model.tig00000889.15 0.8164283646057684 70 Cpa|evm.model.tig00000622.19 0.816026868937562 47 Cpa|evm.model.tig00000144.32 0.815004658651145 48 Cpa|evm.model.tig00020816.8 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.8140448011760386 49 Cpa|evm.model.tig00021127.181 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP72 component 0.8130734108630631 50 Cpa|evm.model.tig00021532.11 FPA 0.8126605357604507 71 Cpa|evm.model.tig00001155.10 Protein ARABIDILLO 1 OS=Arabidopsis thaliana 0.8122042672165919 52 Cpa|evm.model.tig00000144.152 Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica 0.8112735210665312 53 Cpa|evm.model.tig00021348.41 0.8099755738951884 76 Cpa|evm.model.tig00000852.9 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RS31/40/41 splicing factor At-RS31, RS31, RSP31, ATRSP31 0.8085423323581825 55 Cpa|evm.model.tig00020875.14 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC3 component 0.808020622007574 64 Cpa|evm.model.tig00021720.15 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8072777382594942 57 Cpa|evm.model.tig00020904.93 0.8071539164930049 58 Cpa|evm.model.tig00020961.138 0.807021013556941 88 Cpa|evm.model.tig00000404.46 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.8068755141046815 60 Cpa|evm.model.tig00000767.19 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.8066608819739085 61 Cpa|evm.model.tig00021234.6 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ACA P2B-type calcium cation-transporting ATPase ACA11 0.8048120998800743 62 Cpa|evm.model.tig00001164.20 Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thaliana ATCPSF160, CPSF160 0.8047464771580276 63 Cpa|evm.model.tig00001384.5 Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica PP2A-2 0.804272794159855 64 Cpa|evm.model.tig00020553.199 0.8042319756101151 65 Cpa|evm.model.tig00000383.48 0.804154327438936 66 Cpa|evm.model.tig00000670.30 Protein modification.phosphorylation.CMGC kinase superfamily.CK-II kinase.regulatory beta subunit CKB4 0.8034771441965086 71 Cpa|evm.model.tig00021522.4 0.8030756539751268 68 Cpa|evm.model.tig00000459.96 0.802416550223583 70 Cpa|evm.model.tig00000241.109 Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica 0.8016142002207928 71 Cpa|evm.model.tig00020537.47 0.8006348649450705 72 Cpa|evm.model.tig00001365.9 Anoctamin-like protein Os01g0706700 OS=Oryza sativa subsp. japonica 0.8006347353279626 73 Cpa|evm.model.tig00000989.5 0.7985899903503099 74 Cpa|evm.model.tig00000169.28 0.7983507457380278 75 Cpa|evm.model.tig00000459.95 0.7976250691583311 76 Cpa|evm.model.tig00000403.15 0.7969594120349178 77 Cpa|evm.model.tig00000388.52 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component CHB4, SWI3C, ATSWI3C 0.7967357371216529 78 Cpa|evm.model.tig00020554.130 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.components.COX5b component 0.7941293954428416 80 Cpa|evm.model.tig00021238.12 0.7939302514614858 81 Cpa|evm.model.tig00000718.62 0.7909998592112739 84 Cpa|evm.model.tig00001428.15 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.7905252069285498 86 Cpa|evm.model.tig00021098.22 0.790506709814272 87 Cpa|evm.model.tig00000076.28 0.7900218048563298 88 Cpa|evm.model.tig00021179.68 0.7899538044666243 89 Cpa|evm.model.tig00021122.10 Cell cycle.interphase.DNA replication.preinitiation.origin recognition complex.ORC2 component ORC2, ATORC2 0.789952535816736 90 Cpa|evm.model.tig00000880.34 0.7885436533517682 92 Cpa|evm.model.tig00000711.26 0.7851745764639886 96 Cpa|evm.model.tig00000615.27 0.7851350206631496 97 Cpa|evm.model.tig00001065.13 0.7844766613722232 99 Cpa|evm.model.tig00000828.18 0.7842596997633303 100