Sequence Description Alias PCC hrr AT1G50030 target of rapamycin TOR 0.860682090261888 3 AT1G24706 THO2 THO2, AtTHO2 0.8501207717564869 21 AT1G64570 Homeodomain-like superfamily protein DUO3 0.8482937760986325 13 AT1G01040 dicer-like 1 DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1 0.8391994701345644 6 AT3G28030 5'-3' exonuclease family protein UVR1, UVH3 0.8353717315348786 6 AT2G01130 DEA(D/H)-box RNA helicase family protein 0.8349668524722886 6 AT2G31970 DNA repair-recombination protein (RAD50) RAD50, ATRAD50 0.8334240160837957 7 AT4G16310 LSD1-like 3 LDL3 0.8192882536047297 35 AT3G01320 SIN3-like 1 SNL1 0.8101254878105171 9 AT3G50380 Protein of unknown function (DUF1162) 0.8035507461982195 26 AT5G35210 metalloendopeptidases;zinc ion binding;DNA binding 0.8029891616616438 28 AT1G50410 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related 0.80265316184108 12 AT3G54280 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases BTAF1, RGD3, CHA16, ATBTAF1, CHR16 0.8016317822947521 15 AT3G47910 Ubiquitin carboxyl-terminal hydrolase-related protein 0.8007480530030847 38 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with FAT domain 0.8005237723386085 63 AT1G10450 SIN3-like 6 SNL6 0.7977341428086345 16 AT1G05830 trithorax-like protein 2 SDG30, ATX2 0.7975129308476261 17 AT5G42400 SET domain protein 25 SDG25, ATXR7 0.7954582235722506 22 AT2G13370 chromatin remodeling 5 CHR5 0.7918161329633098 47 AT4G00060 Nucleotidyltransferase family protein MEE44 0.7871066007974865 72 AT4G00800 transducin family protein / WD-40 repeat family protein 0.786698140967901 95 AT5G49430 WD40/YVTN repeat-like-containing domain;Bromodomain 0.784779188062117 22 AT1G48090 calcium-dependent lipid-binding family protein 0.7846659540086702 54 AT1G58060 RNA helicase family protein 0.7843006251387183 40 AT2G36720 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 0.7816548113397075 27 AT3G05380 DIRP ;Myb-like DNA-binding domain ATALY2, ALY2 0.7813747840701667 28 AT5G04670 Enhancer of polycomb-like transcription factor protein 0.7801597884602551 29 AT2G33540 C-terminal domain phosphatase-like 3 ATCPL3, CPL3 0.7797978990239676 30 AT4G17330 G2484-1 protein G2484-1, ATG2484-1 0.7781731140432906 71 AT2G33435 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7772267560503581 32 AT3G60400 Mitochondrial transcription termination factor family protein 0.7764700181693003 33 AT1G67120 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding 0.7760496019361155 43 AT5G47010 RNA helicase, putative UPF1, ATUPF1, LBA1 0.7759490642823105 58 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein RAPTOR1, ATRAPTOR1B, RAPTOR1B 0.7755388493834818 48 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; Has 27734 Blast hits to 16708 proteins in 1259 species: Archae - 81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants - 987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI BLink). 0.7742213604367484 46 AT5G20320 dicer-like 4 DCL4, ATDCL4 0.7742041142022548 38 AT1G16710 histone acetyltransferase of the CBP family 12 HAC12 0.7724493674157517 94 AT3G06670 binding 0.7717516287577204 42 AT1G55860 ubiquitin-protein ligase 1 UPL1 0.7689292674606265 48 AT1G77800 PHD finger family protein 0.7685821070342752 59 AT3G12810 SNF2 domain-containing protein / helicase domain-containing protein SRCAP, PIE1, chr13 0.7683557482863754 79 AT3G24880 Helicase/SANT-associated, DNA binding protein 0.7679648343370291 45 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.7678308151879701 46 AT3G47890 Ubiquitin carboxyl-terminal hydrolase-related protein 0.7664063252190241 92 AT3G48190 ataxia-telangiectasia mutated ATM, ATATM 0.7638814311366025 49 AT2G28290 P-loop containing nucleoside triphosphate hydrolases superfamily protein SYD, CHR3 0.761742376233574 91 AT5G06120 ARM repeat superfamily protein 0.7612204697620611 51 AT1G67500 recovery protein 3 ATREV3, REV3 0.7579878363077867 52 AT5G42540 exoribonuclease 2 XRN2, AtXRN2 0.7566036549909017 54 AT1G74580 Pentatricopeptide repeat (PPR) superfamily protein 0.7552596598207575 55 AT2G15900 Phox-associated domain;Phox-like;Sorting nexin, C-terminal 0.7551025023773267 56 AT3G21430 ATALY3, ALY3 0.7547248538362116 57 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF179 (InterPro:IPR003774), Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF179) (TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32 species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi - 3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). 0.7520106802953865 58 AT1G79190 ARM repeat superfamily protein 0.7516607487182079 59 AT5G48120 ARM repeat superfamily protein 0.7500353753993937 60 AT5G18525 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases 0.7488372607943957 65 AT5G65560 Pentatricopeptide repeat (PPR) superfamily protein 0.7477662916053535 63 AT1G63490 transcription factor jumonji (jmjC) domain-containing protein 0.7470620825015835 64 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) UPL3, KAK 0.7466825784647786 83 AT1G63730 Disease resistance protein (TIR-NBS-LRR class) family 0.7462264577438811 67 AT5G15270 RNA-binding KH domain-containing protein 0.745648166018506 68 AT2G30800 helicase in vascular tissue and tapetum HVT1, ATVT-1 0.7456464306459825 69 AT5G25520 SPOC domain / Transcription elongation factor S-II protein 0.7455551780182084 70 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.742506171312087 71 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7416551261605351 74 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). 0.7411740333874353 75 AT5G35840 phytochrome C PHYC 0.7402219573277284 76 AT3G22170 far-red elongated hypocotyls 3 FHY3 0.739250701975071 77 AT3G03300 dicer-like 2 ATDCL2, DCL2 0.738348032028184 78 AT1G77300 histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) LAZ2, CCR1, ASHH2, EFS, SDG8 0.7375369989619913 80 AT3G06290 SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.7374857269954654 81 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). 0.7374685582023546 82 AT5G15540 PHD finger family protein SCC2, ATSCC2, EMB2773 0.7364611230441073 98 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). 0.7359417357085865 84 AT1G13040 Pentatricopeptide repeat (PPR-like) superfamily protein 0.7349166942589943 85 AT5G44750 DNA-directed DNA polymerases REV1, ATREV1 0.7346722842922738 86 AT2G25660 embryo defective 2410 emb2410 0.7344054648098406 87 AT4G32850 nuclear poly(a) polymerase PAP(IV), nPAP 0.7331726976485599 89 AT1G08060 ATP-dependent helicase family protein MOM1, MOM 0.7318183245553987 90 AT1G63700 Protein kinase superfamily protein YDA, EMB71, MAPKKK4 0.7312023513013233 91 AT3G27670 ARM repeat superfamily protein RST1 0.7302414013477309 93 AT5G40820 Ataxia telangiectasia-mutated and RAD3-related ATR, ATRAD3, ATATR 0.7295646873177423 94 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function FPL (InterPro:IPR019155); Has 243 Blast hits to 233 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). 0.7268864344794442 95 AT1G04390 BTB/POZ domain-containing protein 0.7252504697770075 97 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter Fmp27 protein domain SAB 0.7240876933363429 98 AT3G48060 BAH domain ;TFIIS helical bundle-like domain 0.723629345782268 99 AT3G59410 protein kinase family protein GCN2 0.7235051354376152 100