Sequence Description Alias PCC hrr AT3G62030 rotamase CYP 4 ROC4 0.912425267815917 2 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8999961489349261 2 AT3G25920 ribosomal protein L15 RPL15 0.8930384638673263 24 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.890171304832568 4 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8845956175982127 22 AT3G54210 Ribosomal protein L17 family protein 0.8730565875292288 17 AT3G26060 Thioredoxin superfamily protein ATPRX Q 0.8643946229722211 20 AT1G32990 plastid ribosomal protein l11 PRPL11 0.8636794256667815 18 AT5G13510 Ribosomal protein L10 family protein 0.8619699230394752 21 AT5G21920 YGGT family protein YLMG2, ATYLMG2 0.8572948808931043 10 AT1G73060 Low PSII Accumulation 3 LPA3 0.8554184489296968 11 AT5G30510 ribosomal protein S1 RPS1, ARRPS1 0.8547656484996853 23 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6 family protein 0.8543092003740616 32 AT5G14320 Ribosomal protein S13/S18 family 0.8537605886049252 20 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8535619444381509 16 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.8525576958560807 32 AT1G35680 Ribosomal protein L21 0.8487136145034538 43 AT4G15510 Photosystem II reaction center PsbP family protein 0.846951276006873 18 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8451271174208479 56 AT3G63410 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein IEP37, E37, APG1, VTE3 0.8448464189745101 20 AT3G13120 Ribosomal protein S10p/S20e family protein 0.8438349722204476 43 AT4G02530 chloroplast thylakoid lumen protein 0.8400924283004843 73 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8400087984988924 77 AT3G12780 phosphoglycerate kinase 1 PGK1 0.8374849716095889 56 AT5G07020 proline-rich family protein 0.8346767495291255 70 AT3G51820 UbiA prenyltransferase family protein CHLG, G4, ATG4 0.8330637333899933 26 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8271215808753781 91 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.826956231422532 49 AT1G74970 ribosomal protein S9 TWN3, RPS9 0.8258589330502278 30 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8236249614314569 66 AT1G05190 Ribosomal protein L6 family emb2394 0.8218946033664383 95 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8214068758201788 96 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8213799183792838 82 AT5G63310 nucleoside diphosphate kinase 2 NDPK2, NDPK IA IA, NDPK1A, NDPK IA, ATNDPK2 0.8199211692488895 44 AT4G01310 Ribosomal L5P family protein 0.8196700503231861 55 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.819170634294868 75 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8185530478656384 64 AT2G21280 NAD(P)-binding Rossmann-fold superfamily protein ATSULA, GC1, SULA 0.8174471457872721 48 AT3G04790 Ribose 5-phosphate isomerase, type A protein 0.8158841985548595 71 AT2G43030 Ribosomal protein L3 family protein 0.8153128174027937 54 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8152162126870922 44 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXR, PDE129 0.8147485102312053 46 AT5G13120 cyclophilin 20-2 ATCYP20-2, CYP20-2 0.8143855428801788 47 AT1G32470 Single hybrid motif superfamily protein 0.814334025731223 94 AT1G43560 thioredoxin Y2 Aty2, ty2 0.8129970113894491 84 AT4G24770 31-kDa RNA binding protein ATRBP31, CP31, ATRBP33, RBP31 0.8125412380105119 77 AT2G47590 photolyase/blue-light receptor 2 PHR2 0.8123446293374502 53 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8122127839056522 54 AT3G27850 ribosomal protein L12-C RPL12-C 0.8111326805829172 55 AT3G27830 ribosomal protein L12-A RPL12-A, RPL12 0.8109512945777844 57 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.8103301704547572 58 AT5G45390 CLP protease P4 NCLPP4, CLPP4 0.8101562984967481 59 AT1G50900 Ankyrin repeat family protein GDC1 0.8095797978294964 71 AT1G07320 ribosomal protein L4 RPL4 0.808901622569424 61 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, LIN2, HEMF1 0.8074013417246715 64 AT2G48070 resistance to phytophthora 1 RPH1 0.8072857330812064 65 AT3G63490 Ribosomal protein L1p/L10e family 0.8070002537046179 66 AT1G29070 Ribosomal protein L34 0.8058151591016928 67 AT3G61870 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 200 Blast hits to 200 proteins in 73 species: Archae - 0; Bacteria - 112; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). 0.8049691593457232 90 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8020004716267848 72 AT2G24090 Ribosomal protein L35 0.8006981188132517 74 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.795457392389201 76 AT1G64150 Uncharacterized protein family (UPF0016) 0.7949440299957331 77 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.7941080868774953 81 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.7939339706754279 80 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.7934114175094507 82 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.7930945950077071 83 AT1G77490 thylakoidal ascorbate peroxidase TAPX 0.7905519065699473 92 AT3G18890 NAD(P)-binding Rossmann-fold superfamily protein 0.7902918542343931 90 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.7880764745418861 94 AT4G01690 Flavin containing amine oxidoreductase family PPOX, HEMG1, PPO1 0.7874116593672591 95 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.7832983995425122 100