Sequence Description Alias PCC hrr AT2G28605 Photosystem II reaction center PsbP family protein 0.8734095619569741 7 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8687710490632135 3 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8619217635504397 32 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8615544903708804 4 AT2G30170 Protein phosphatase 2C family protein 0.8608012704642154 5 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8549390677241872 6 AT3G26710 cofactor assembly of complex C CCB1 0.8523864193527814 19 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.8498716465213885 12 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8494893761353687 56 AT1G73060 Low PSII Accumulation 3 LPA3 0.8461575872654431 22 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8442544428446668 59 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.8442424441766972 41 AT1G16880 uridylyltransferase-related 0.8438579341919583 22 AT3G55330 PsbP-like protein 1 PPL1 0.8437132798643304 52 AT1G54500 Rubredoxin-like superfamily protein 0.8433086039203179 29 AT2G39470 PsbP-like protein 2 PPL2 0.8411217578750355 94 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.837933747134721 24 AT1G32470 Single hybrid motif superfamily protein 0.836358229214224 60 AT1G05140 Peptidase M50 family protein 0.8347441618896694 19 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8299276858621872 20 AT1G35340 ATP-dependent protease La (LON) domain protein 0.8290225225366292 21 AT1G18730 NDH dependent flow 6 NDF6 0.8288825409137225 30 AT1G04640 lipoyltransferase 2 LIP2 0.8265731433016698 29 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8239254339090443 24 AT1G43560 thioredoxin Y2 Aty2, ty2 0.823579801248827 70 AT2G43560 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8234796626623382 89 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8202972734020908 78 AT3G48200 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast hits to 148 proteins in 42 species: Archae - 0; Bacteria - 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). 0.8200914919344774 28 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8196108368983562 83 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.818475822609601 66 AT4G34190 stress enhanced protein 1 SEP1 0.8162006102239798 81 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8147295894452014 33 AT1G59840 cofactor assembly of complex C CCB4 0.8127876639252197 34 AT1G27480 alpha/beta-Hydrolases superfamily protein 0.8115669736471081 36 AT4G10300 RmlC-like cupins superfamily protein 0.8111166991623809 37 AT1G22630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). 0.8109257406819042 38 AT1G70760 inorganic carbon transport protein-related CRR23 0.8108890028737752 71 AT2G35370 glycine decarboxylase complex H GDCH 0.8099840357100107 78 AT2G21530 SMAD/FHA domain-containing protein 0.8074420238130449 78 AT1G50450 Saccharopine dehydrogenase 0.8065418432543159 57 AT2G01590 chlororespiratory reduction 3 CRR3 0.8056921289342588 99 AT1G50900 Ankyrin repeat family protein GDC1 0.8051646884565729 78 AT5G58330 lactate/malate dehydrogenase family protein 0.8036475325688164 48 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) emb1629, APO2 0.8033801770131974 49 AT3G44020 thylakoid lumenal P17.1 protein 0.8030272381586396 50 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8019201659563677 86 AT2G48070 resistance to phytophthora 1 RPH1 0.8018130182943046 62 AT2G17695 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8001685018473548 55 AT2G05310 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7992449457807467 56 AT5G52780 Protein of unknown function (DUF3464) 0.7982990976267725 59 AT2G36990 RNApolymerase sigma-subunit F SIGF, SIG6, SOLDAT8, ATSIG6 0.7962712668479254 77 AT5G52970 thylakoid lumen 15.0 kDa protein 0.7955030069973437 61 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.7954275461160332 73 AT3G45050 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7941793704129888 63 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.7937266304839778 64 AT5G46390 Peptidase S41 family protein 0.7916170474732593 67 AT4G34830 Pentatricopeptide repeat (PPR) superfamily protein MRL1 0.7914636811634234 68 AT1G34000 one-helix protein 2 OHP2 0.7906562743731709 70 AT2G37450 nodulin MtN21 /EamA-like transporter family protein 0.7904108673656963 71 AT1G74880 NAD(P)H:plastoquinone dehydrogenase complex subunit O NDH-O 0.7886093779203285 73 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.7878199006838226 97 AT2G35130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7873270705893136 76 AT3G55250 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7865277648385993 80 AT3G57190 peptide chain release factor, putative 0.7852428949019801 79 AT4G21210 PPDK regulatory protein ATRP1, RP1 0.7851687389969575 80 AT1G49380 cytochrome c biogenesis protein family 0.784691902828799 82 AT5G02830 Tetratricopeptide repeat (TPR)-like superfamily protein 0.7834161631558424 83 AT5G52440 Bacterial sec-independent translocation protein mttA/Hcf106 HCF106 0.7822837073185359 84 AT5G39830 Trypsin family protein with PDZ domain DEGP8, DEG8 0.7819707129703539 85 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARASP 0.7819529331219398 94 AT5G35220 Peptidase M50 family protein EGY1 0.781583635714191 96 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.7810966658721242 90 AT1G18170 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.7801392537222871 92 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.7796914422803287 93 AT3G55630 DHFS-FPGS homolog D FPGS3, DFD, ATDFD 0.7792493651706407 94 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3143 (InterPro:IPR021489); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.7788451234058089 95 AT5G28750 Bacterial sec-independent translocation protein mttA/Hcf106 0.7783642945520632 96 AT1G54350 ABC transporter family protein 0.7782524777746304 97 AT5G20935 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.7781348664172046 99 AT4G13220 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.778054096630613 100