Sequence Description Alias PCC hrr AT5G48590 Protein of unknown function (DUF760) 0.8109491678756006 1 AT4G27800 thylakoid-associated phosphatase 38 TAP38, PPH1 0.7884896418747706 5 AT5G19540 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.7883805112500881 3 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.7842486913496348 52 AT2G30390 ferrochelatase 2 FC-II, FC2, ATFC-II 0.7836495082100202 14 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.7712779936391159 72 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). 0.7647608512833176 7 AT5G38660 acclimation of photosynthesis to environment APE1 0.7640406724146991 60 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.76010543397003 66 AT4G33470 histone deacetylase 14 ATHDA14, hda14 0.757409214284197 51 AT3G15840 post-illumination chlorophyll fluorescence increase PIFI 0.7533438119260873 13 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.7479998958890395 74 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 FNR2, ATLFNR2 0.7437820930532638 88 AT2G31040 ATP synthase protein I -related 0.7369446053897613 71 AT3G50270 HXXXD-type acyl-transferase family protein 0.7361041525685426 21 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family protein 0.733461064014991 49 AT3G15110 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3082 (InterPro:IPR021434); Has 77 Blast hits to 77 proteins in 38 species: Archae - 0; Bacteria - 37; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.7318155133765359 94 AT1G76730 NagB/RpiA/CoA transferase-like superfamily protein 0.7282606901462106 31 AT2G23840 HNH endonuclease 0.7271560069608921 28 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2301, transmembrane (InterPro:IPR019275); Has 140 Blast hits to 140 proteins in 72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). 0.7256976573306181 29 AT1G06460 alpha-crystallin domain 32.1 ACD31.2, ACD32.1 0.7214428832193451 31 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CSB3, CLB4, GCPE, HDS, ISPG 0.7162279716209041 99 AT1G02475 Polyketide cyclase/dehydrase and lipid transport superfamily protein 0.7142369388522948 65 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.7137893394916085 89 AT2G24820 translocon at the inner envelope membrane of chloroplasts 55-II TIC55-II 0.7137686141233802 62 AT1G67280 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein 0.7130808428634159 66 AT5G38510 Rhomboid-related intramembrane serine protease family protein 0.7120916509666607 38 AT3G27925 DegP protease 1 DEGP1, Deg1 0.7089612675909837 80 AT4G14210 phytoene desaturase 3 PDS3, PDS, PDE226 0.7077502857144503 43 AT1G03160 FZO-like FZL 0.7036820698925361 46 AT1G32500 non-intrinsic ABC protein 6 NAP6, ATNAP6 0.7026035515286053 61 AT5G14260 Rubisco methyltransferase family protein 0.7025006565305896 68 AT3G18500 DNAse I-like superfamily protein 0.702342227707377 49 AT1G02560 nuclear encoded CLP protease 5 NCLPP1, CLPP5, NCLPP5 0.6968003497202326 52 AT1G49970 CLP protease proteolytic subunit 1 CLPR1, SVR2, NCLPP5 0.6964557279417432 53 AT1G19740 ATP-dependent protease La (LON) domain protein 0.6954293760123704 54 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family protein 0.6908979786435004 57 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits to 90 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). 0.6881137696506159 60 AT3G01920 DHBP synthase RibB-like alpha/beta domain 0.6836979349441272 63 AT3G58010 plastoglobulin 34kD PGL34 0.682930997058902 66 AT2G03390 uvrB/uvrC motif-containing protein 0.6812840178119502 68 AT1G06650 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.6801729998545277 70 AT2G46100 Nuclear transport factor 2 (NTF2) family protein 0.6799919115498305 71 AT1G79600 Protein kinase superfamily protein 0.6777936977433366 73 AT5G11840 Protein of unknown function (DUF1230) 0.6777350308772869 74 AT2G25605 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 75 Blast hits to 75 proteins in 20 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). 0.6761439933541848 77 AT1G66970 SHV3-like 2 SVL2 0.67612207078499 78 AT5G02790 Glutathione S-transferase family protein GSTL3 0.675571652940664 79 AT3G63520 carotenoid cleavage dioxygenase 1 ATCCD1, CCD1, NCED1, ATNCED1 0.6732922787444209 95 AT1G50020 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.6721392362189041 83 AT2G03550 alpha/beta-Hydrolases superfamily protein 0.6706882586327367 84 AT1G43670 Inositol monophosphatase family protein 0.6688260809444379 85 AT1G65190 Protein kinase superfamily protein 0.6668074128567334 89 AT4G09900 methyl esterase 12 MES12, ATMES12 0.6602626634348766 97