Sequence Description Alias PCC hrr AT2G05620 proton gradient regulation 5 PGR5 0.8916604977752789 1 AT5G02120 one helix protein OHP 0.8620494494360584 2 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8574614102858011 6 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8542143622737647 51 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.852188572891967 41 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8458215654999295 72 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8443138238273993 62 AT1G50320 thioredoxin X THX, ATHX, ATX 0.842421947742772 19 AT4G09650 ATP synthase delta-subunit gene ATPD 0.8414098882751316 49 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.8402004234199357 17 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8373708552765796 79 AT3G50820 photosystem II subunit O-2 OEC33, PSBO-2, PSBO2 0.8359466707573492 27 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8342812759946924 20 AT3G54900 CAX interacting protein 1 CXIP1, ATGRXCP 0.8333758736523977 14 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.8332082191790117 66 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8320847521101086 59 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8320647975841102 34 AT1G74730 Protein of unknown function (DUF1118) 0.8319840798347788 83 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8317485211256105 99 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8303919901270062 35 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8300299738494381 29 AT1G22850 SNARE associated Golgi protein family 0.8280172468654556 23 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.827914502107722 91 AT5G08050 Protein of unknown function (DUF1118) 0.8254033804134536 59 AT1G60950 2Fe-2S ferredoxin-like superfamily protein FED A, ATFD2 0.8250711260313516 27 AT1G03600 photosystem II family protein PSB27 0.8249859488486687 28 AT2G06520 photosystem II subunit X PSBX 0.8245896866510217 29 AT1G52230 photosystem I subunit H2 PSAH2, PSI-H, PSAH-2 0.8244952192096558 31 AT1G22630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 87 Blast hits to 86 proteins in 34 species: Archae - 0; Bacteria - 13; Metazoa - 27; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). 0.8223234216757658 31 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.8187737443775365 74 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.8180210686793803 34 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8173115484603899 35 AT1G70760 inorganic carbon transport protein-related CRR23 0.8170816721056848 64 AT3G16140 photosystem I subunit H-1 PSAH-1 0.8150948512872619 40 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8130898547177875 42 AT1G18730 NDH dependent flow 6 NDF6 0.8124430637536196 52 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.811182439675923 65 AT1G32060 phosphoribulokinase PRK 0.8092612206089456 72 AT5G09660 peroxisomal NAD-malate dehydrogenase 2 PMDH2 0.8078272651937736 84 AT1G67090 ribulose bisphosphate carboxylase small chain 1A RBCS1A 0.8073390503684262 56 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8070359376252259 75 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8067566935683644 83 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8066870534948464 89 AT3G26570 phosphate transporter 2;1 PHT2;1, ORF02 0.8063975878586873 51 AT3G54660 glutathione reductase GR, EMB2360, ATGR2 0.8041386464402006 53 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8041062922667505 67 AT1G50732 unknown protein. 0.7977486745972467 57 AT3G15850 fatty acid desaturase 5 ADS3, FAD5, JB67, FADB 0.7973751701837317 59 AT3G47070 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7969672974674956 60 AT2G34460 NAD(P)-binding Rossmann-fold superfamily protein 0.795794732837312 61 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.7947788384709891 62 AT5G62140 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.7938115867229654 63 AT1G65260 plastid transcriptionally active 4 PTAC4, VIPP1 0.7925060875988886 64 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7924737627555827 65 AT1G26220 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.792462516153776 66 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein 0.7906562743731709 70 AT1G23740 Oxidoreductase, zinc-binding dehydrogenase family protein 0.7904631470004422 68 AT1G14150 PsbQ-like 2 PQL1, PQL2 0.7885801785741351 94 AT1G53670 methionine sulfoxide reductase B 1 MSRB1, ATMSRB1 0.7884000061621327 73 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.7878543627302789 74 AT4G33010 glycine decarboxylase P-protein 1 AtGLDP1, GLDP1 0.7874669696732958 76 AT1G62750 Translation elongation factor EFG/EF2 protein ATSCO1/CPEF-G, SCO1, ATSCO1 0.786975032026831 100 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.7868865447653064 78 AT2G39730 rubisco activase RCA 0.7847274276472982 86 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7837473469106288 81 AT3G59400 enzyme binding;tetrapyrrole binding GUN4 0.7826821707507626 84 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.7814352874282061 85 AT2G05310 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.7814275826279997 86 AT5G46110 Glucose-6-phosphate/phosphate translocator-related TPT, APE2 0.7773826617354519 91 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). 0.7764395766582824 92 AT1G01790 K+ efflux antiporter 1 KEA1, ATKEA1 0.7764176172145592 93 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.776257270163877 94 AT2G30170 Protein phosphatase 2C family protein 0.7745193159512525 100 AT2G35830 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G35810.1); Has 155 Blast hits to 155 proteins in 54 species: Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). 0.7740634392282875 98